Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01921 and BPUM_1076
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_01921___yjbC.1.24716.seq
# -bsequence dna-align/BPUM_1076___yjbC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01921___yjbC-BPUM_1076___yjbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01921___yjbC-BPUM_1076___yjbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01921___yjbC
# 2: BPUM_1076___yjbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 590
# Identity: 434/590 (73.6%)
# Similarity: 434/590 (73.6%)
# Gaps: 22/590 ( 3.7%)
# Score: 1528.0
#
#
#=======================================
BSNT_01921___ 1 ATGAACTGGTATGAAAAGCTTAGCGAGTATTTTCCAATTGAAGAAATGAA 50
|||||.||||||||||||||.||.||.||.||.||.||.|||||||||||
BPUM_1076___y 1 ATGAATTGGTATGAAAAGCTCAGTGAATACTTCCCGATAGAAGAAATGAA 50
BSNT_01921___ 51 ATCAAAAGCGCATATGGAAGCTCTTCTGAAA-GAGCGAAGCGATATTTAT 99
.|||||||.||||||||||||| ||.|.||| ||..||||.|||.|||||
BPUM_1076___y 51 GTCAAAAGAGCATATGGAAGCT-TTATTAAAGGAAAGAAGTGATGTTTAT 99
BSNT_01921___ 100 CATAAAGATGAAGGCAAACATCATATTTTAATGTTTGCGGAATTCGATTC 149
|||||.||.|||||....||||||.|..|.||||..||.|||||.|||..
BPUM_1076___y 100 CATAAGGAGGAAGGACCTCATCATGTGATGATGTACGCCGAATTTGATCA 149
BSNT_01921___ 150 TTTTATCTTCGTTGATTATCTGTATGTGTCTAAGGATGCAAGAGGGCAGG 199
|||.|||||..||||||||.|.|.|||.||.|..|||||||||||..|.|
BPUM_1076___y 150 TTTCATCTTTATTGATTATTTATTTGTTTCCAGAGATGCAAGAGGTGAAG 199
BSNT_01921___ 200 GGCTTGGCGG--CAA-----ATTGATCGCGAAGCTGAAAAAGAAAAATAA 242
|.|| ||| ||| |||.|| ||||||||..|.|||||.||
BPUM_1076___y 200 GCCT---CGGATCAAAGCTCATTCAT----AAGCTGAAGGAAAAAAAGAA 242
BSNT_01921___ 243 GCCCATATTGCTCGAGGTGGAACCTGTGGATGAAGATGATACTGATACAG 292
.||.||.|||||.|||||.||.|||||.||||||||||||.|.|||||.|
BPUM_1076___y 243 ACCGATCTTGCTTGAGGTTGAGCCTGTAGATGAAGATGATGCAGATACTG 292
BSNT_01921___ 293 AAAAACGCCTGAGGTTTTATCAAAGAGAGCATTTCAAGCATGCTCAGTCA 342
.|||||||||.|.||||||.|||||||||||.|||||||||||..|.|||
BPUM_1076___y 293 CAAAACGCCTAAAGTTTTACCAAAGAGAGCACTTCAAGCATGCAGAATCA 342
BSNT_01921___ 343 ATTGGGTACCGGCGCCGGTCATTGGCTACGAATGAAGTAAACAAGATGGA 392
||.||.||....|||.|||||.|.||.||.||||||||.|||...|||||
BPUM_1076___y 343 ATCGGTTATAAACGCAGGTCACTTGCAACAAATGAAGTGAACCGCATGGA 392
BSNT_01921___ 393 GATTCTGTACTGGTCAC--CAAAAACAGAATCAGAAGAAGAAATTCTTGA 440
.||.||.||.|||||.| |..|.|.|.||| ||.||||||||..|.||
BPUM_1076___y 393 AATCCTTTATTGGTCGCCTCTTATAGATAAT--GAGGAAGAAATGATGGA 440
BSNT_01921___ 441 AGCCATGAAACAGACATATGAAAACATTCATACTTATAAAGACGAGAAAT 490
.||.||||...||||.||||||...||.|||||.|||||||||||..|||
BPUM_1076___y 441 GGCTATGAGGAAGACCTATGAACGAATCCATACGTATAAAGACGAAGAAT 490
BSNT_01921___ 491 GGTACGGGGAATCGTACGAAAAAACGGATGAAGTCCTGAAACTCATTGAT 540
||||.|||.|.|||||.||..|....|||||.||..|.||..|||||||
BPUM_1076___y 491 GGTATGGGCAGTCGTATGAGGATGTTGATGATGTATTAAAGGTCATTGA- 539
BSNT_01921___ 541 GAAGA-AAAACAAAAAAATATTTTCGATCAGTTAAGCTAA 579
.||.| ||||||||||||||||||||||||..|...||||
BPUM_1076___y 540 AAATAGAAAACAAAAAAATATTTTCGATCATCTCGACTAA 579
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