Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01904 and BPUM_1061
See
Amino acid alignment /
Visit
BSNT_01904 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_01904___appF.1.24716.seq
# -bsequence dna-align/BPUM_1061___appF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01904___appF-BPUM_1061___appF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01904___appF-BPUM_1061___appF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01904___appF
# 2: BPUM_1061___appF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1052
# Identity: 722/1052 (68.6%)
# Similarity: 722/1052 (68.6%)
# Gaps: 91/1052 ( 8.7%)
# Score: 2403.0
#
#
#=======================================
BSNT_01904___ 1 -------------------------ATG--ACAGCAGCTAAT----CAAG 19
||| |||| |.||||| .|||
BPUM_1061___a 1 ATGACCCTTGCTCATAATCAACCACATGCAACAG-ATCTAATAGAGAAAG 49
BSNT_01904___ 20 AAACAATCTTAGAGCTTCGTGAC--GTAAAAAAATACTTTCCGAT----- 62
||||.||..|.||.|| |..|| .|.||||||.|.||||||||
BPUM_1061___a 50 AAACCATTCTCGAACT--GAAACAGATCAAAAAACATTTTCCGATTAAAG 97
BSNT_01904___ 63 CCGGTCAGGCCTTTTTCA-AAGAAAAGTCGGTGATGTAAAAGCGGTGGAT 111
||||| .|.||||| ||| ||||||||||..||.|||||.||.||.
BPUM_1061___a 98 CCGGT-----GTCTTTCAGAAG-AAAGTCGGTGCAGTCAAAGCTGTTGAC 141
BSNT_01904___ 112 GGTGTTTCAT---TTT--CGTTAAAAAAAGGAGAAACACTCGGAATCGTT 156
|| ||| ||| .|.|..|.|||||.||.||..|.||.||.||.
BPUM_1061___a 142 GG-----CATAGATTTGAAGATTTATAAAGGTGAGACGTTAGGCATAGTG 186
BSNT_01904___ 157 GGAGAGTCGGGCTGCGGAAAATCGAC----TGCCGGCAGAACGATGATCA 202
||.||.||.||.||.||.|||||.|| .||||| ||.|||||..
BPUM_1061___a 187 GGGGAATCAGGATGTGGTAAATCAACATTAGGCCGG----ACCATGATTC 232
BSNT_01904___ 203 GACTGTACAAACCGACAGAGGGCCAAATTCTTTTTAAAGGGCAGGATATT 252
|..|.||..||||.||.||.||.|||||.||||||||||||||.||.||.
BPUM_1061___a 233 GTTTATATGAACCAACTGACGGTCAAATCCTTTTTAAAGGGCAAGACATC 282
BSNT_01904___ 253 TCCAATCTGTCAGAGGAGAAGCTGCGGAAGAGTGTC----CGCAAAAATA 298
|||..|.|.||.||....|||.| ||||...|| ||.|||||.|
BPUM_1061___a 283 TCCCGTATATCGGAATCAAAGTT----AAGACAATCAACACGAAAAAACA 328
BSNT_01904___ 299 TTCAAATGGTTTTCCAAGATCCATTTGCTTCGTTAAACCCGAGAAAGACC 348
|||||||||||||.||||||||.|||||.||..|.|||||.|||||.||.
BPUM_1061___a 329 TTCAAATGGTTTTTCAAGATCCCTTTGCATCACTCAACCCTAGAAAAACA 378
BSNT_01904___ 349 CTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACCAT 398
||.||...||||||.||.||.||.|..||.||.||..||.|.|||.||.|
BPUM_1061___a 379 CTTCGAAGCATCATCAAAGAACCCTACAAAACACATCACTTATATTCCTT 428
BSNT_01904___ 399 GCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTC 448
....|||.||||.||||||||.|||.||||.||..|||..||.||.||||
BPUM_1061___a 429 AAAAGAAAGAAATGAAAAAGTAGAACAGCTTCTATCAAAGGTGGGCCTTC 478
BSNT_01904___ 449 ACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGT 498
|.||....|||||....||.|||||||||||.|||||.|||||.|||.|.
BPUM_1061___a 479 ATCCAAGCTTTGCAAATCGCTATCCCCATGAATTTTCTGGCGGGCAGAGG 528
BSNT_01904___ 499 CAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCAT 548
|||||.|||||||||||..|.||.||..|..|||||||.||..|||||||
BPUM_1061___a 529 CAGCGAATCGGCATTGCTCGTGCGCTTGCCATGAATCCCGAAATGATCAT 578
BSNT_01904___ 549 TGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGA 598
.||||||||||||||.||.||.||||||||||||||||||||.||.||||
BPUM_1061___a 579 CGCAGATGAGCCGGTATCAGCGCTTGATGTATCCATTCAGGCACAGGTGA 628
BSNT_01904___ 599 TTAACTTGATGGAGGAATTACAGGAAGAATTTAATCTTACGTATCTATTT 648
||||..||||||||||..|.|||||.||||||.|.||.||.|||||.|||
BPUM_1061___a 629 TTAATCTGATGGAGGAGCTTCAGGAGGAATTTGACCTGACCTATCTGTTT 678
BSNT_01904___ 649 ATCTCTCATGATCTGAGTGTCGTCCGCCATATCAGCGACAGAGTCGGAGT 698
||||||||.||..|.|||||.|||.|.||.||.||.||..|||||||.||
BPUM_1061___a 679 ATCTCTCACGACTTAAGTGTGGTCAGGCACATTAGTGATCGAGTCGGCGT 728
BSNT_01904___ 699 AATGTATCTTGGCAAAATGATGGAACTGACCGGCAAGCATGAG-CTTTAT 747
.||||||||.||||||||||||||.||..|.|..||||| .|| ||.||.
BPUM_1061___a 729 GATGTATCTCGGCAAAATGATGGAGCTTGCTGATAAGCA-CAGCCTGTAC 777
BSNT_01904___ 748 GACAACCCGCTTCACCCATATACCCAAGCGCTTTTATCCTCCGTTCCTGT 797
||..|.|||||.|||||||||||.||.||.||..|.||.||.||.|||||
BPUM_1061___a 778 GATGAACCGCTCCACCCATATACACAGGCACTGCTTTCTTCAGTCCCTGT 827
BSNT_01904___ 798 TACAAGAAAAAGAGGATC-TGTCAAACGTGAACGCATTGTCCTGAAGGGA 846
|||..|.|||| |||.|| .||||||.|.||.||.||..|.||..|.||.
BPUM_1061___a 828 TACCCGTAAAA-AGGGTCAGGTCAAAAGAGAGCGGATCATGCTTCAAGGC 876
BSNT_01904___ 847 GAACTGCCTAGTCCGGCCAACCCGCCAAAAGGCTGCGTATTCCACACAAG 896
||.|||||.|||||.||.||.|||||||||||.|||||||||||||||||
BPUM_1061___a 877 GATCTGCCAAGTCCTGCGAATCCGCCAAAAGGGTGCGTATTCCACACAAG 926
BSNT_01904___ 897 ATGTCCTGTTGCAAAACCGATATGCAAGGAACAAATACCAGAATTTAAAG 946
||||||...|||.||||..||.||.||.|||.||||||||..||||.|||
BPUM_1061___a 927 ATGTCCGCATGCGAAACAAATCTGTAAAGAAAAAATACCATCATTTCAAG 976
BSNT_01904___ 947 AAGCTGCT-----CCCAGCCACTTTGTGGCTTGTCACCTTTA--TAGCTA 989
|| | ||.|.||||||.||.||.||||||||||| ..|||.
BPUM_1061___a 977 AA-----TTAAAACCAAACCACTTCGTTGCCTGTCACCTTTACGACGCTT 1021
BSNT_01904___ 990 A- 990
|
BPUM_1061___a 1022 AA 1023
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.