Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01899 and BPUM_1058
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_01899___fabF.1.24716.seq
# -bsequence dna-align/BPUM_1058___fabF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01899___fabF-BPUM_1058___fabF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01899___fabF-BPUM_1058___fabF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01899___fabF
# 2: BPUM_1058___fabF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1263
# Identity: 972/1263 (77.0%)
# Similarity: 972/1263 (77.0%)
# Gaps: 42/1263 ( 3.3%)
# Score: 3653.0
#
#
#=======================================
BSNT_01899___ 1 ATGACTAAAAAAAGAGTAGTTGTTACAGGACTTGGAGCATTATCTCCACT 50
|||..|||||||.|||||||||||||||||.|.||.||.||..|.||.||
BPUM_1058___f 1 ATGGATAAAAAACGAGTAGTTGTTACAGGATTGGGTGCTTTGACACCTCT 50
BSNT_01899___ 51 TGGCAACGACGTCGATACAAGTTGGAATAACGC--AATCAACGGTGTGTC 98
|||||||||.||.||..|||..|||||.||.|| .|.|| |||||.||
BPUM_1058___f 51 TGGCAACGATGTAGAATCAACATGGAAAAATGCTTTAGCA--GGTGTATC 98
BSNT_01899___ 99 CGGAATCGGTCCGATCACTCGTGTTGACGCTGAA--GAATATCCGGCAAA 146
.|||.|.||.||.|||||.|||||.|| ||.|| ||||||.|.|||||
BPUM_1058___f 99 AGGAGTTGGACCAATCACACGTGTCGA--CTCAAGTGAATATACAGCAAA 146
BSNT_01899___ 147 AGTTGCCGCTGAATTAAAAGATTTTAATGTTGAAGATTATATGGATAAAA 196
|||.||.||.|||||||||||||||||..||||||||||.|||||.||||
BPUM_1058___f 147 AGTGGCAGCAGAATTAAAAGATTTTAACATTGAAGATTACATGGAGAAAA 196
BSNT_01899___ 197 AAGAAGCCAGAAAAATGGACCGCTTTACACAATATGCGGTTGTGGCTGCG 246
|||||||..|||||||||..|||||.||.||||||||.|||||.|||||.
BPUM_1058___f 197 AAGAAGCACGAAAAATGGCACGCTTCACGCAATATGCAGTTGTTGCTGCT 246
BSNT_01899___ 247 AAAATGGCGGTTGAAGATGCAGATCTTAACATTACCGATGAGATCGCGCC 296
.|||.||||.|.|||||..||..||||.|.||.||.|||||.|||||.||
BPUM_1058___f 247 CAAAAGGCGCTAGAAGACTCACGTCTTGAAATCACAGATGAAATCGCACC 296
BSNT_01899___ 297 GAGAGTCGGTGTTTGGGTAGGCTCCGGTATCGGAGGACTTGAAACACT-- 344
..|.||.|||||.|||||.||.||.|||||.||.||||||||||||.|
BPUM_1058___f 297 ACGTGTTGGTGTATGGGTTGGATCTGGTATTGGCGGACTTGAAACATTTG 346
BSNT_01899___ 345 -AGAGTCTCAATTTGAAATCTTCTTAACAAAAGGCTCAAGACGGGTAAGC 393
|||| ||.||||||.|.|..|.||..|||||..|||||||.||||||
BPUM_1058___f 347 AAGAG---CAGTTTGAAGTGTATTCAAATAAAGGAGCAAGACGCGTAAGC 393
BSNT_01899___ 394 CCGTTTTTCGTGCCAATGATGATTCCTGACATGGCGACAGGCCAGATTTC 443
|||||.|||||.||||||||||||||.||.|||||.|||||.||.|||||
BPUM_1058___f 394 CCGTTCTTCGTTCCAATGATGATTCCAGATATGGCAACAGGTCAAATTTC 443
BSNT_01899___ 444 TATTGCATTAGGAGCAAAAGGGGTGAACTCTTGTACGGTTACAGCATGTG 493
.||||||.|.||.|||||||||||.|||||||||||.||.||||||||||
BPUM_1058___f 444 AATTGCACTTGGCGCAAAAGGGGTTAACTCTTGTACTGTAACAGCATGTG 493
BSNT_01899___ 494 CTACAGGAACGAACTCCATCGGTGACGCGTTTAAGGTTATTCAGCGCGGT 543
|.|||||.||.|||||.||.|||||.||.|||||.||.|||||||||||.
BPUM_1058___f 494 CAACAGGTACAAACTCAATTGGTGATGCATTTAAAGTCATTCAGCGCGGA 543
BSNT_01899___ 544 GATGCAGACGTGATGGTCACAGGCGGAACAGAAGCGCCGCTGACAAGAAT 593
||||||||.|.||||.|||||||||||||||||||||||.|.||||.|||
BPUM_1058___f 544 GATGCAGATGCGATGATCACAGGCGGAACAGAAGCGCCGTTAACAAAAAT 593
BSNT_01899___ 594 GTCATTCGCCGGCTTTAGTGCCAACAAAGCGCTGTCTACTAATCCAGATC 643
|||.||.||.|||||..||||.||||||||.||.||.||.|||||.||||
BPUM_1058___f 594 GTCGTTTGCTGGCTTCTGTGCGAACAAAGCTCTTTCGACAAATCCTGATC 643
BSNT_01899___ 644 CGAAAACAGCGAGCCGCCCGTTCGATAAAAACCGTGATGGCTTTGTCATG 693
|..|.|||||.|||||.||.||.||.|||||||||||.||.|||||.|||
BPUM_1058___f 644 CAGAGACAGCAAGCCGTCCATTTGACAAAAACCGTGACGGATTTGTTATG 693
BSNT_01899___ 694 GGGGAAGGTGCAGGGATTATCGTTCTTGAAGAACTTGAGCATGC------ 737
||.||.||||||||||||.||||.||||||||||||||||||||
BPUM_1058___f 694 GGTGAGGGTGCAGGGATTGTCGTCCTTGAAGAACTTGAGCATGCATTAAA 743
BSNT_01899___ 738 -CCTGGCCCGCGGCGCTAAAATTTACGGAGAAATTGTCGGCTACGGCTCA 786
|.||| ||||.|| |||||.|.||||||.||.||.||.||.|||
BPUM_1058___f 744 ACGTGG--CGCGACG-----ATTTATGCAGAAATCGTTGGATATGGATCA 786
BSNT_01899___ 787 ACCGGAGACGCTTATCATATCACAGCGCCGGC-CCAAGACGGTGAAGGCG 835
||.||.||.||.||||||||.|||||.||||| |||| ||||.|||||||
BPUM_1058___f 787 ACTGGTGATGCGTATCATATTACAGCACCGGCTCCAA-ACGGAGAAGGCG 835
BSNT_01899___ 836 GAGCGAGAGCGATGCAAGAAGCCATTAAAGATGCAGGCATTGCACCT--- 882
|.|...|.||.|||.|||||||.|||..||||||.|| .||| .||
BPUM_1058___f 836 GCGTCCGCGCAATGAAAGAAGCAATTCGAGATGCTGG-TTTG--TCTGTG 882
BSNT_01899___ 883 GAGGAAATTGATTACATCAATGCTCACGGGACAAGCACGTATTACAACGA 932
||.|||||||||||.||||||||.|||||.||||||||....||||||||
BPUM_1058___f 883 GAAGAAATTGATTATATCAATGCCCACGGAACAAGCACACCGTACAACGA 932
BSNT_01899___ 933 CAAATACGAAACAATGGCGATT-AAGACCGTTTTTGGCGAGCATGCGCAT 981
.||||..||||||||||||||| |||| .||.||.||.||||||||..||
BPUM_1058___f 933 TAAATTTGAAACAATGGCGATTAAAGA-AGTGTTCGGAGAGCATGCAAAT 981
BSNT_01899___ 982 AAACTTGCGGTAAGCTCTACAAAATCGATGACAGGCCACCT-CTTAGGAG 1030
.|.||||||.|.||.||.|||||||||||||||||.|||.| ||| ||.|
BPUM_1058___f 982 CAGCTTGCGATCAGTTCGACAAAATCGATGACAGGTCACTTACTT-GGCG 1030
BSNT_01899___ 1031 CAGCCGGCGGTATTGAAGCCATTTTCTCTATCCTGGCCATTAAAGAAGGT 1080
||||.|||||..|.|||||.|||||||||.|.||.||.||||||||..|.
BPUM_1058___f 1031 CAGCAGGCGGAGTAGAAGCTATTTTCTCTGTACTTGCGATTAAAGACAGC 1080
BSNT_01899___ 1081 GTGATTCCGCCGACAATCAATATTCAAACACCTGACGAAGAATGTGATTT 1130
||.|||||.||.||.||.||..||.|||||||.||.||||||||||||.|
BPUM_1058___f 1081 GTCATTCCTCCAACCATTAACCTTGAAACACCGGATGAAGAATGTGATCT 1130
BSNT_01899___ 1131 GGATTATGTGCCTGATGAAGCCCGCAGACAGGAACT-TAATTATGTTCTC 1179
.|||||||||.|..|||||||.||...|.|.|||.| .||.| .|.|||.
BPUM_1058___f 1131 TGATTATGTGGCAAATGAAGCACGTTCAAAAGAAGTACAAGT-GGCTCTA 1179
BSNT_01899___ 1180 AGCAACTCATTAGGATTCGGCGGACACAACGCAACATTAATCTTTAAGAA 1229
||.||||||.|.||.||.||||||||.||.||.|||.|.||||||||.||
BPUM_1058___f 1180 AGTAACTCACTTGGCTTTGGCGGACATAATGCGACAATTATCTTTAAAAA 1229
BSNT_01899___ 1230 ATATCAATCATAA 1242
|||..||.|.|||
BPUM_1058___f 1230 ATACGAAGCGTAA 1242
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