Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01888 and BPUM_1049
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_01888___yjzC.1.24716.seq
# -bsequence dna-align/BPUM_1049___yjzC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01888___yjzC-BPUM_1049___yjzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01888___yjzC-BPUM_1049___yjzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01888___yjzC
# 2: BPUM_1049___yjzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 131/187 (70.1%)
# Similarity: 131/187 (70.1%)
# Gaps: 14/187 ( 7.5%)
# Score: 413.5
#
#
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BSNT_01888___ 1 GTGGGACAGCAGCACC-----AATTCCGGCCCGGACAGAAAGCGCCTAAT 45
.||||.||||||||.| ||.||.| ||| |.|||||.||.|||
BPUM_1049___y 1 ATGGGTCAGCAGCATCAGTTTAAATCAG----GGA-ATAAAGCACCAAAT 45
BSNT_01888___ 46 AACGGTGTCTACGTAGAAATCGGCGAGACAGGGAGCATGGTTAAAAACCC 95
||.|||||.|||||.||.|||||.||.||.||.||.|||||.|||.|.||
BPUM_1049___y 46 AATGGTGTGTACGTCGAGATCGGTGAAACCGGCAGTATGGTGAAAGATCC 95
BSNT_01888___ 96 TCAAAAGGTCCATCTGTC-AGCAGGGGAAATGTTCCCCGA-AACATCAAA 143
|..||||.|..|.|| || ||||||.||..|.||.||.|| ||| ||.||
BPUM_1049___y 96 TTTAAAGATTAAGCT-TCAAGCAGGCGATGTCTTTCCGGATAAC-TCGAA 143
BSNT_01888___ 144 CCACAACCGGCTGTGGACCTACAAAAGAAAGCCGTGA 180
|||.|||||..|.||||||||..|.||||||||.|.|
BPUM_1049___y 144 CCATAACCGTGTTTGGACCTATCAGAGAAAGCCATAA 180
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