Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01767 and BPUM_0977

See Amino acid alignment / Visit BSNT_01767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence dna-align/BSNT_01767___yhzC.1.24716.seq
#    -bsequence dna-align/BPUM_0977___yhzC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01767___yhzC-BPUM_0977___yhzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01767___yhzC-BPUM_0977___yhzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01767___yhzC
# 2: BPUM_0977___yhzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     167/252 (66.3%)
# Similarity:   167/252 (66.3%)
# Gaps:          39/252 (15.5%)
# Score: 489.0
# 
#
#=======================================

BSNT_01767___      1 ATGAAAGAGAAAAAATCGTACACTGAGCTCATGAAGTCCCGCAACACGCA     50
                     |||||||||||||||.||||..|||||||||||||||||||||||||.||
BPUM_0977___y      1 ATGAAAGAGAAAAAAACGTATGCTGAGCTCATGAAGTCCCGCAACACCCA     50

BSNT_01767___     51 AAAAACAAAAGAATTCGATGTCACAAT----GACGGATATCTACATTCAA     96
                     ||||||..|||||..||..||.||.||    |||    |||||.||||||
BPUM_0977___y     51 AAAAACCGAAGAAAACGGCGTGACGATTTTAGAC----ATCTATATTCAA     96

BSNT_01767___     97 ATGGTGCTCGATGAATC-CTTGTATAACCGTCGGCTT-GCCATGCTGACG    144
                     |||||..|.|||||..| ||| |||||.|..| |||| .||.|.||.|..
BPUM_0977___y     97 ATGGTTTTAGATGAGGCGCTT-TATAAACAGC-GCTTAACCTTCCTTAGA    144

BSNT_01767___    145 GACCAAATTAACAAAGCCTTGGA----CGAAAAAGATAAAGATGCGTTTC    190
                     ||..|.|||.|.||.||..||||    ||    .|||.|| |.|||.|||
BPUM_0977___y    145 GAAGAGATTGATAAGGCACTGGATCAGCG----TGATGAA-AAGCGATTC    189

BSNT_01767___    191 TTACG--CTCTCTAAAG---AATATGCAGCGCTCAAGCAGAGC---GAAT    232
                      .|||  ||.||   ||   |||||||||      |.||..||   .|.|
BPUM_0977___y    190 -AACGACCTGTC---AGCTCAATATGCAG------AACACTGCTTACATT    229

BSNT_01767___    233 AA    234
                     ||
BPUM_0977___y    230 AA    231


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