Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01747 and BPUM_0972
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_01747___aprN.1.24716.seq
# -bsequence dna-align/BPUM_0972___aprE1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01747___aprN-BPUM_0972___aprE1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01747___aprN-BPUM_0972___aprE1.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01747___aprN
# 2: BPUM_0972___aprE1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1217
# Identity: 807/1217 (66.3%)
# Similarity: 807/1217 (66.3%)
# Gaps: 142/1217 (11.7%)
# Score: 2550.0
#
#
#=======================================
BSNT_01747___ 1 GTGAGAAGCAAAAAATTGTG--GATCAGCTTGTTGTTTGC-GTTAACGTT 47
||||.|| |.||||.|||| ||..||..|.||.||.|| || |..|
BPUM_0972___a 1 GTGAAAA--AGAAAAATGTGATGACAAGTGTTTTATTGGCTGT---CCCT 45
BSNT_01747___ 48 AATCT-TTACGATGGCGTTCAGCAACATGTCTGCGCAGGC---------- 86
..||| || |||||||..||.| |.||||
BPUM_0972___a 46 CTTCTGTT---------TTCAGCAGGATTT----GGAGGCTCCATGGCAA 82
BSNT_01747___ 87 -TGCCG-GA-------AAAAGCAG-TACAGAAAAGAAATACATTGTCGGA 126
||||| || |||..||| ||..|||||||..||.|||||.||.
BPUM_0972___a 83 ATGCCGAGACGGTCTCAAAGTCAGATAGTGAAAAGAGCTATATTGTTGGC 132
BSNT_01747___ 127 TTTAAGCAGACAATGAGTGCCATGAGTTCCGCC---------------AA 161
||||| .||| |||||| ||
BPUM_0972___a 133 TTTAA------------AGCC------TCCGCCACCACAAACAGCTCTAA 164
BSNT_01747___ 162 GAAAAAGGATGTTATTTCTGAAAAAGGCGGAAAGGTTCAAAAGCAATTTA 211
||||.|.|..||.| ||.||||.||.|||||..|..|||||||||.|
BPUM_0972___a 165 GAAACAAGCCGTCA---CTCAAAATGGTGGAAAACTAGAAAAGCAATAT- 210
BSNT_01747___ 212 AGTAT-GTTAACGCGGCCGCAGCAACATTG----GAT----GAAAAAGCT 252
.||.| .|||| .|||||| ||| | ||| |||.||||.
BPUM_0972___a 211 CGTCTCATTAA---TGCCGCA-CAA----GTAAAGATGTCAGAACAAGCC 252
BSNT_01747___ 253 G-TAAAAGAATTGAAAAAAGATCCGAGCGTTGCATATGTGGAAGAAGATC 301
| .||||.|.||| ||.|.||.||.|||.||||.||.||.||||||||.|
BPUM_0972___a 253 GCGAAAAAACTTG-AACATGACCCTAGCATTGCTTACGTAGAAGAAGACC 301
BSNT_01747___ 302 ATATTGCACATGAATATGCGCAATCTGTTCCTTATGGCATTTCTCAAATT 351
|.|..|||.|.|.||||||.|||.|.||.||||||||.||..|||||||.
BPUM_0972___a 302 ACAAAGCAGAAGCATATGCACAAACCGTCCCTTATGGAATCCCTCAAATC 351
BSNT_01747___ 352 AAAGCGCCGGCTCTTCACTCTCAAGGCTACACAGGCTCTAACGTAAAAGT 401
|||||.||.|||.|.|||.|||||||.||.|.|||..||||.||.|||||
BPUM_0972___a 352 AAAGCTCCAGCTGTACACGCTCAAGGTTATAAAGGTGCTAATGTCAAAGT 401
BSNT_01747___ 402 AGCTGTTATCGACAGCGGAATTGACTCTTCTCATCCTGACTTAAACGTCA 451
||||||..|.||.|..||.||..||.||.|.||.|||||||||||.||..
BPUM_0972___a 402 AGCTGTCCTTGATACTGGCATCCACGCTGCACACCCTGACTTAAATGTTG 451
BSNT_01747___ 452 GAGGCGGAGCAAGCTTCGTTCCTTCTGAAACAAA-CCCATACCAGGACGG 500
.||||||.||.||||||||.|||||.||..|||| .||| .|||.|||
BPUM_0972___a 452 CAGGCGGTGCCAGCTTCGTCCCTTCAGAGCCAAATGCCA-CCCAAGAC-- 498
BSNT_01747___ 501 CAGTTC--TCAC--GGTACGCATGTCGCCGGTACGATTGCCGCTCTTAAT 546
.||| |||| ||.||.||.||.|||||.|||||.||.||.|||.||
BPUM_0972___a 499 --TTTCAATCACATGGAACTCACGTAGCCGGAACGATCGCTGCCCTTGAT 546
BSNT_01747___ 547 AACTCAATCGGTGTTCTGGGCGTAGCGCCAAGCGCATCATTATATGCAGT 596
|||.||||.||||||||.||.||.||.|||||.||.||..|||||||.||
BPUM_0972___a 547 AACACAATTGGTGTTCTTGGGGTCGCTCCAAGTGCCTCCCTATATGCTGT 596
BSNT_01747___ 597 AAAAGTGCTTGATTCAACAG-------GAAGCGGCCAATATAGCTGGATT 639
.||||| |||..||.| || |||.||||||||||||||.
BPUM_0972___a 597 GAAAGT-----ATTAGACCGCTATGGCGA--CGGACAATATAGCTGGATC 639
BSNT_01747___ 640 ATTAACGGCATTGAGTGGGCCATTTCCAACAATATGGATGTTATCAACAT 689
||||.|||.|||||.|||||..|..||||.|||||||||||.||||||||
BPUM_0972___a 640 ATTAGCGGTATTGAATGGGCAGTAGCCAATAATATGGATGTCATCAACAT 689
BSNT_01747___ 690 GAGCCTTGGCGGACCTACTGGTTCTACAGCGCTGAAAACAGTAGTTGATA 739
||||.|.||||||||.|..|||||.|||||.||.||||..|..|||||||
BPUM_0972___a 690 GAGCTTAGGCGGACCAAACGGTTCAACAGCACTTAAAAATGCCGTTGATA 739
BSNT_01747___ 740 AAGCGGTTTCCAGCGGTATCGTCGTTGCTGCCGCAGCCGGAAACGAAGGT 789
.||||..|..|.||||..||||.||||..||.||.||.||.|||..||||
BPUM_0972___a 740 CAGCGAATAACCGCGGAGTCGTTGTTGTGGCGGCTGCAGGTAACTCAGGT 789
BSNT_01747___ 790 TCATCCGGAAGCACAAGCACAGTCGGCTACCCTGCAAAATATCCTTCTAC 839
||..|.||....|||||.|||||.|||||.||.|||||||||..||||||
BPUM_0972___a 790 TCTACTGGTTCTACAAGTACAGTTGGCTATCCAGCAAAATATGATTCTAC 839
BSNT_01747___ 840 TATTGCAGTAGGTGCGGTAAACAGCAGCAACCAAAGAGCTTCATTCTCCA 889
.|||||.||.|.|...||.||||||||.||....|||...||.|..||||
BPUM_0972___a 840 CATTGCCGTTGCTAATGTGAACAGCAGTAATGTCAGAAACTCGTCTTCCA 889
BSNT_01747___ 890 GCGTAGGTTCTGAGCTTGATGTAATGGCTCCTGGCGTGTCCATCCA---- 935
|||.||||.||||..|.|||||....||.|||| ||.|.||.|
BPUM_0972___a 890 GCGCAGGTCCTGAATTAGATGTTTCTGCACCTG----GTACTTCTATTTT 935
BSNT_01747___ 936 AAGCACACTTCC------TGGAGGCACTTACGGCGCTTATAACGGAACGT 979
|||.|||.|.|| ||||..|||.| ||||||..|||||.|
BPUM_0972___a 936 AAGTACAGTACCAAGCAGTGGATACACAT------CTTATACTGGAACAT 979
BSNT_01747___ 980 CCATGGCGACTCCTCACGTTGCCGGAGCAGCAGCGCTAATTCTTTCTAAG 1029
|.||||||.|||||||.||.||.||||||||||||||.|||||||||||.
BPUM_0972___a 980 CTATGGCGTCTCCTCATGTAGCAGGAGCAGCAGCGCTTATTCTTTCTAAA 1029
BSNT_01747___ 1030 CACCCGACTTGGACAAACGCGCAAGTCCGTGATCGTTTAGAAAGCACTGC 1079
.||||||.|....|||...|.||.||.||..|.||.|||||||.|||.||
BPUM_0972___a 1030 TACCCGAATCTATCAACTACTCAGGTTCGCCAGCGCTTAGAAAACACAGC 1079
BSNT_01747___ 1080 AACATATCTTGGAAACTCTTTCTACTATGGAAAAGGGTTAATCAACGTAC 1129
||||...|||||.|||||.|||||.||.||||||||||||||||||||.|
BPUM_0972___a 1080 AACACCGCTTGGTAACTCCTTCTATTACGGAAAAGGGTTAATCAACGTTC 1129
BSNT_01747___ 1130 AAGCAGCTGCACAATAA 1146
||||.|||.|..|.|||
BPUM_0972___a 1130 AAGCGGCTTCTAACTAA 1146
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