Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01741 and BPUM_0968
See
Amino acid alignment /
Visit
BSNT_01741 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence dna-align/BSNT_01741___yhfJ.1.24716.seq
# -bsequence dna-align/BPUM_0968___yhfJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01741___yhfJ-BPUM_0968___yhfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01741___yhfJ-BPUM_0968___yhfJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: BPUM_0968___yhfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1010
# Identity: 742/1010 (73.5%)
# Similarity: 742/1010 (73.5%)
# Gaps: 34/1010 ( 3.4%)
# Score: 2624.0
#
#
#=======================================
BSNT_01741___ 1 ATGTTATTTATAGACAATCAA-AATATCAATGATCCGCGGATCAATCTTG 49
|||.|.|||||.||.||..|| ||.|| .|||||||...|||.|||.|.|
BPUM_0968___y 1 ATGCTGTTTATCGATAACGAACAACAT-TATGATCCAATGATTAATTTGG 49
BSNT_01741___ 50 CTATCGAGGAGTACTGTGTAAAGCATTTAGACCCTGAACAGCAA--TATT 97
|.||.||.||.||.||..||||..||||||||||.|| ||.|| ||.|
BPUM_0968___y 50 CAATTGAAGAATATTGCTTAAAATATTTAGACCCAGA--AGAAACGTACT 97
BSNT_01741___ 98 TGCTCTTTTATGTGAATCAACCGTCTATTATCATTGGAAAAAACCAAAAT 147
||||.||.|||.|.||.||.|||||.||||||||||||||.|||||||||
BPUM_0968___y 98 TGCTGTTCTATATTAACCAGCCGTCGATTATCATTGGAAAGAACCAAAAT 147
BSNT_01741___ 148 ACAATAGAAGAAATCAATACAAAATATGTTGAGGAAAACGGGATTATCGT 197
|||||||||||||||||.|||||.|||||.||.||.|||||.||.|..||
BPUM_0968___y 148 ACAATAGAAGAAATCAACACAAAGTATGTGGAAGACAACGGCATCAAAGT 197
BSNT_01741___ 198 CGTCCGCCGTTTATCAGGCGGGGGAGCTGTGTACCATGATCTGGGGAACT 247
.||||||||..|.||.||.||.||.||.||.||||||||....||.||||
BPUM_0968___y 198 TGTCCGCCGCCTGTCCGGTGGTGGCGCAGTTTACCATGACAAAGGAAACT 247
BSNT_01741___ 248 TGAACTTCAGCTTTATTACCAAGGATGACGGGGACAGCTTTCATAACTTT 297
|.||||||||||||||.||.||.||.||.|||||||||||.|||||.|||
BPUM_0968___y 248 TAAACTTCAGCTTTATCACAAAAGACGATGGGGACAGCTTCCATAATTTT 297
BSNT_01741___ 298 AAAAAATTCACTGAGCCGGTGATTCAGGCGTTACATCAGCTTGGAGTTGA 347
|||||.|||||.|||||.||.|||||||||.||.|..|.||.||.||..|
BPUM_0968___y 298 AAAAAGTTCACGGAGCCAGTCATTCAGGCGCTAGAAAAACTAGGCGTCAA 347
BSNT_01741___ 348 AGCCGAATTAAGCGGCCGGAACGACATTGTAGTGGATGGCCGGAAAATAT 397
|||.||||||||.||..|.||.|||||..|.|.||||||.||||||||.|
BPUM_0968___y 348 AGCTGAATTAAGTGGTAGAAATGACATCATGGCGGATGGTCGGAAAATTT 397
BSNT_01741___ 398 CCGGAAACGCTCAGTTTGCAACGAAAGGCCGTATTTTCAGCCACGGCACC 447
|.|||||.||.||||||||.||.|.|||.||||||||||||||.||.||.
BPUM_0968___y 398 CAGGAAATGCCCAGTTTGCGACAAGAGGACGTATTTTCAGCCATGGTACA 447
BSNT_01741___ 448 CTCATGTTTGATTCAGCCATTGATCATGTTGTATCAGCATTAAAGGTGAA 497
||..|.||||||||||..|||||.||||||||.||.||.|||||.|||||
BPUM_0968___y 448 CTGCTATTTGATTCAGAAATTGAACATGTTGTTTCTGCTTTAAATGTGAA 497
BSNT_01741___ 498 AAAGGATAAAATTGAATCAAAAGGCATCAAATCGATCAGAAGCCGAGTGG 547
||||||.||.||||||||||||||.||.|||||.||.||||||.|.||.|
BPUM_0968___y 498 AAAGGAAAAGATTGAATCAAAAGGTATTAAATCCATTAGAAGCAGGGTTG 547
BSNT_01741___ 548 CAAACATCAGTGAGTTTCTCGATGATAAAATGACCACCGAAGAATTCCGC 597
|.||.||.|||||.||..|.|||.|.||||||||.||.|||||||||.|
BPUM_0968___y 548 CCAATATTAGTGAATTAATGGATCAAAAAATGACAACAGAAGAATTCAG- 596
BSNT_01741___ 598 AGCCATT-TGCTTCGCCATATTTTTAACACGAACGACATTGGAAACGTGC 646
|...||| ||.|..||.|.|||||..||||.|| |||..|.||.|
BPUM_0968___y 597 AAAAATTCTGTTAAGCTACATTTTCGACACAAA------TGGGGATGTCC 640
BSNT_01741___ 647 CGGAGTATAAGCTGACGGAAAAAGATTGGGAGACCATTCATCAAATTTC- 695
|..|.|||.|..||||.||.|||||||||||.|..|||||..|.|||||
BPUM_0968___y 641 CTCAATATCAATTGACTGAGAAAGATTGGGAAAAGATTCACGAGATTTCC 690
BSNT_01741___ 696 ---GAAAGAGCGCTATCAGAATTGGGATTGGAACTACGGCCGCTCACCGA 742
||| ||.|||||.||.|||||.||||||||||||||.|||||||
BPUM_0968___y 691 CGGGAA----CGATATCAAAAATGGGAATGGAACTACGGCCGTTCACCGA 736
BSNT_01741___ 743 AATTTAACCTTAATCATTCGAAACGTTATCCGGTTGGATCGATCGATTTG 792
|||||||..|..|.|||||.||..|.|.|.|.|..||.||.||.|||.|.
BPUM_0968___y 737 AATTTAATTTGCAGCATTCTAAGAGATTTTCAGCAGGCTCCATTGATCTT 786
BSNT_01741___ 793 CGCCTAGAGGTCAAGAAAGGCAAAATCGAGGACTGCAAAATCTTCGGAGA 842
||..||||.||.||.|||||.|..|||.||||.|||||||||||.||.||
BPUM_0968___y 787 CGATTAGAAGTGAAAAAAGGGATGATCCAGGATTGCAAAATCTTTGGTGA 836
BSNT_01741___ 843 TTTCTTCGGTGTCGGTGATGTATCTGAAATTGAAAACCTGCTGGTCGGAA 892
||||||.|||||.||.|||.|..||||.||||||||....||..|.||..
BPUM_0968___y 837 TTTCTTTGGTGTAGGGGATATTGCTGATATTGAAAAAAGACTCATTGGGC 886
BSNT_01741___ 893 AACAATACGAACGC--AGCG-TCATCGCTGATGTGCTCGAAGGTGTGAAT 939
|.||||||||.||| |.|| |||.| ||.||..|.||||.|.||.|
BPUM_0968___y 887 AGCAATACGATCGCAAAACGATCAGC---GACGTATTAGAAGATATGGA- 932
BSNT_01741___ 940 CTCAAG---CATTACTTTGGGAACATTACGAAAGAGGATTTCCTTGATCT 986
||.| ||.|||||.||.|||.|..|.|||||||||||.||||||.|
BPUM_0968___y 933 --CATGCGCCACTACTTCGGCAACGTATCAAAAGAGGATTTTCTTGATTT 980
BSNT_01741___ 987 GATTTATTAA 996
||||||||||
BPUM_0968___y 981 GATTTATTAA 990
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.