Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01739 and BPUM_0966

See Amino acid alignment / Visit BSNT_01739 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_01739.1.24716.seq
#    -bsequence dna-align/BPUM_0966___yhfH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01739-BPUM_0966___yhfH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01739-BPUM_0966___yhfH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01739
# 2: BPUM_0966___yhfH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:      99/299 (33.1%)
# Similarity:    99/299 (33.1%)
# Gaps:         169/299 (56.5%)
# Score: 319.0
# 
#
#=======================================

BSNT_01739         1 ATGTCCTCCTATCTTTTCAAAAAAATTGATCCTCCTTCAATATACCCATT     50
                                                                       
BPUM_0966___y      0 --------------------------------------------------      0

BSNT_01739        51 TTTCTTGAAAAAAGCATGTTTTAAACATTGTATCAAAACAGTTATTGATT    100
                                                                       
BPUM_0966___y      0 --------------------------------------------------      0

BSNT_01739       101 TTTGCAATCTGTTATATTACAATGAAATCACTACAAAGGGGAAAGAGGGA    150
                                                                       
BPUM_0966___y      0 --------------------------------------------------      0

BSNT_01739       151 TTGGTTATGCTGGGGAAAATCACAGAATTTTTTAGAAACCTGCCTTCGAA    200
                           |||||.||.|||||||||||.|||||||||||..||||.||.||
BPUM_0966___y      1 ------ATGCTAGGAAAAATCACAGAGTTTTTTAGAAATTTGCCCTCAAA     44

BSNT_01739       201 AAAGTGTGCGGAATGCGGAAAAAAGATAGAA--GAGCAGCATGAGTGCTA    248
                     |||.||..|..||||.||  |||.|||..||  ||.||.||||||||.||
BPUM_0966___y     45 AAAATGCACAAAATGTGG--AAATGATTTAATGGAACAACATGAGTGTTA     92

BSNT_01739       249 TGGTAAT--ATCTGCAATGACTGTATAAAAGTAAACGATTTGTAA----    291
                     .||||||  ||.||  |.||.||...|.||||||...||.| |||    
BPUM_0966___y     93 CGGTAATGAATGTG--AGGAATGCTCACAAGTAAGTTATCT-TAAATAA    138


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