Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01738 and BPUM_0965
See
Amino acid alignment /
Visit
BSNT_01738 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:14
# Commandline: needle
# -asequence dna-align/BSNT_01738___gltT.1.24716.seq
# -bsequence dna-align/BPUM_0965___gltT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01738___gltT-BPUM_0965___gltT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01738___gltT-BPUM_0965___gltT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01738___gltT
# 2: BPUM_0965___gltT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1315
# Identity: 964/1315 (73.3%)
# Similarity: 964/1315 (73.3%)
# Gaps: 50/1315 ( 3.8%)
# Score: 3429.5
#
#
#=======================================
BSNT_01738___ 1 ATGAAAAGAATT-AAGTTTGGATTAGCCACACAAATATTCGTTGGACTTA 49
||||||| |||| ||.|||||||||||.||||||||..|..|.||.||||
BPUM_0965___g 1 ATGAAAA-AATTAAAATTTGGATTAGCTACACAAATCCTAATCGGTCTTA 49
BSNT_01738___ 50 TTCTAGGTGTCATTGTTGGCG---TCATTT--GGTATGGCAACCCA-GCA 93
||||.||||||.|||||||.| ||.||| ||| |||||| ||.
BPUM_0965___g 50 TTCTCGGTGTCGTTGTTGGGGCAATCTTTTTCGGT-----AACCCAGGCG 94
BSNT_01738___ 94 TTGCCTACTTACCTGCAGCCAATCGGGGATCTCTTTTTACGCTTAATCAA 143
||| ..|||||..|..|.|||||.||.||..||||.|||.|..|.||.||
BPUM_0965___g 95 TTG-AGACTTATTTAAAACCAATTGGAGACTTCTTCTTAAGACTCATTAA 143
BSNT_01738___ 144 AATGATAGTGATTCCTATTGTTGTCTCCAGCTTAATCATCGGTGTAGCCG 193
.|||||.|||||.||.|||||.||.||.||||||||..|.|||||.||.|
BPUM_0965___g 144 GATGATTGTGATACCAATTGTCGTATCTAGCTTAATTTTAGGTGTTGCAG 193
BSNT_01738___ 194 GTGCAGGAAATGGAAAGCAAGTCGGTAAATTAGGCTTCAGAACGATTCTG 243
||||.||..||||.||..|.||.||.|||.|.||.||.|||||.|||||.
BPUM_0965___g 194 GTGCCGGTGATGGTAAAAAGGTAGGGAAACTTGGTTTTAGAACCATTCTT 243
BSNT_01738___ 244 TACTTCGAGATCATCACGACTTTTGCCATTATTCTCGGACTAGCCCTTGC 293
||.||.||.||.|||||.||.|||||.||||||||.||.||.|..|||||
BPUM_0965___g 244 TATTTTGAAATTATCACAACATTTGCGATTATTCTTGGTCTTGTGCTTGC 293
BSNT_01738___ 294 AAACATCTTCCATCCGGGTACAGGAGTTAATAT-----ACACGAAGCTCA 338
||||.|..|.||.||.|||.||||.|||.|..| |.||| .|
BPUM_0965___g 294 AAACTTTGTTCAACCTGGTGCAGGCGTTGACTTTGGTCATACG-----GA 338
BSNT_01738___ 339 AAAATCGGACATCAGTCAATATGTTGAAACTGAAAAAGAACAAAGTAATA 388
||||...||.||.||.||.|||||||||||.||||||||||||||....|
BPUM_0965___g 339 AAAACAAGATATTAGCCAGTATGTTGAAACGGAAAAAGAACAAAGCGGCA 388
BSNT_01738___ 389 AATCAGTGGCAGAAACGTTCCTCCATATTGTGCCGACAAACTTCTTCCAG 438
|||||.|.||.||.||||||||.|||||.||.||.||.|||||||||||.
BPUM_0965___g 389 AATCAATTGCTGATACGTTCCTACATATCGTTCCAACGAACTTCTTCCAA 438
BSNT_01738___ 439 TCATTGGTCGAAGGGGATCTTCTAGCCATCATTTGCTTTACAGTACTATT 488
|||||||..|||||.|||.|.||.||.||.||||.||||||.||..||||
BPUM_0965___g 439 TCATTGGCGGAAGGTGATTTGCTTGCGATTATTTTCTTTACTGTGTTATT 488
BSNT_01738___ 489 TGCATTGGGTATTTCCGCAATCGGTGAAAGAGGCAAGCCTGTATTAGCCT 538
||||.|.||..||||.||.||.||||||.|.|||||.||.||..|.||||
BPUM_0965___g 489 TGCACTTGGCGTTTCAGCCATTGGTGAACGCGGCAAACCAGTGCTCGCCT 538
BSNT_01738___ 539 TTTTTGAAGGTGTATCCCATGCCATGTTCCACGTTGTAAACCTTGTGATG 588
|.|||||||||||.||.||.|||||||||||.||.||.||..||||.|||
BPUM_0965___g 539 TCTTTGAAGGTGTGTCACACGCCATGTTCCATGTCGTCAATGTTGTAATG 588
BSNT_01738___ 589 AAAGTGGCGCCATTCGGCGTTTTCGCTCTTATCGGAGTGACTGTGTCTAA 638
||||..||.|||||.||.||.|||||.||.||.||.||||||||.||.||
BPUM_0965___g 589 AAAGCTGCACCATTTGGTGTCTTCGCACTCATTGGTGTGACTGTCTCAAA 638
BSNT_01738___ 639 ATTCGGACTCGGTTCTCTTATCTCTCTCGGAAAGCTCGTTGGATTGGTTT 688
|||.||.||.|..||||||||.||..|.||.|||||.||.||..|.||||
BPUM_0965___g 639 ATTTGGTCTTGAATCTCTTATTTCATTAGGTAAGCTTGTGGGTCTTGTTT 688
BSNT_01738___ 689 ATGTCGCGCTTGCTTTCTTCTTAATTGTTATTTTCGGGATTGTCGCAAAA 738
||.|.|||||.|||.|||||.|.||.|||.|.|||||.|||.|.|.|||.
BPUM_0965___g 689 ATTTTGCGCTCGCTCTCTTCCTTATCGTTGTATTCGGAATTATTGGAAAG 738
BSNT_01738___ 739 ATTGCCGGCATCAGCATCTTCAAGTTCCTTGCTTACATGAAGGACGAAAT 788
||....|||.|.|..||.||||..||.||||||||||||||.||||||||
BPUM_0965___g 739 ATGATTGGCGTTAATATTTTCAGATTTCTTGCTTACATGAAAGACGAAAT 788
BSNT_01738___ 789 -CTTACTGGCGTTCAGTACGTCCAGCTCTGAAACGGTTCTTCCGCGCATC 837
||| ||.||.||.|||||.||||||||||||||.|||.|.||..|..||
BPUM_0965___g 789 GCTT-CTTGCCTTTAGTACATCCAGCTCTGAAACAGTTTTACCAAGAGTC 837
BSNT_01738___ 838 ATGGAAAAAATGGAGAAAATCGGATGTCCGAAAGGAATTGTTTCATTTGT 887
|||||.|||||||||...||.|||||||||||.|||||||||||.||.||
BPUM_0965___g 838 ATGGATAAAATGGAGCGCATTGGATGTCCGAAGGGAATTGTTTCTTTCGT 887
BSNT_01738___ 888 CATTCCGATCGGTTACACGTTTAACTTAGACGGTTCCGTTCTCTATCAAT 937
.||.||.||||||||.||.||||||||.|||||.|||||..|.||||||.
BPUM_0965___g 888 TATCCCAATCGGTTATACATTTAACTTGGACGGCTCCGTCTTGTATCAAG 937
BSNT_01738___ 938 CTATTGCCGCACTCTTTTTAGCACAGGTATATGGCATTGATTTGACGATT 987
|.||.||.||.||.||..|.||||||||||||||||||||..|.||.|||
BPUM_0965___g 938 CGATCGCTGCGCTTTTCCTTGCACAGGTATATGGCATTGACCTTACAATT 987
BSNT_01738___ 988 TGGCACCAGATTACGCTTGTGCTCGTCTTAATGGTGTCATCTAAAGGGAT 1037
...||.|||.|.||.|||.|.||.||..|.||||||.||||||||||.||
BPUM_0965___g 988 GTCCAGCAGCTCACACTTATTCTTGTGCTGATGGTGACATCTAAAGGAAT 1037
BSNT_01738___ 1038 GGCTGCCGTGCCTGGTACTTCTTTTGTTGTCTTGCTTGCAACGCTTGGCA 1087
|||||||||.||||||||.||.||||||||.||.|||||.||..|.||||
BPUM_0965___g 1038 GGCTGCCGTTCCTGGTACATCCTTTGTTGTATTACTTGCCACATTAGGCA 1087
BSNT_01738___ 1088 CCATCGGCGTTCCGGCTGAAGGACTTGCCTTTATTGCCGGCGTAGACCGC 1137
|.|||||.||.||.||.|||||.||.||.||||||||.||.|||||.||.
BPUM_0965___g 1088 CAATCGGTGTACCTGCCGAAGGTCTAGCATTTATTGCAGGTGTAGATCGA 1137
BSNT_01738___ 1138 ATCATGGATATGGCACGAACAGTTGTCAACCTGACTGGTAACGCGCTTGC 1187
||||||||||||||||||||||||||.|||.|.||.||.||.||.|||||
BPUM_0965___g 1138 ATCATGGATATGGCACGAACAGTTGTTAACTTAACAGGAAATGCACTTGC 1187
BSNT_01738___ 1188 TGCCGTTGTGATGTCTAAATGGGAAGGCATGTTTAAT-----CCTGCGAA 1232
.||.||||||||||||||||||||||| |.||| ||||..||
BPUM_0965___g 1188 AGCAGTTGTGATGTCTAAATGGGAAGG-----TCAATATGACCCTGAAAA 1232
BSNT_01738___ 1233 AGCAGAAACTGTTATGTCCCAATCGAAAA-------CAGAACAAAACGCA 1275
||.|.|....||.||| |.|.||.|| |.|||| .|||.||
BPUM_0965___g 1233 AGGACATCGCGTGATG----ACTGGACAAGATGTACCTGAAC-CAACACA 1277
BSNT_01738___ 1276 ACCATTTCTGGTTAA 1290
.| ||||..|.|||
BPUM_0965___g 1278 GC--TTTCAAGCTAA 1290
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.