Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01725 and BPUM_0958
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_01725___hemE.1.24716.seq
# -bsequence dna-align/BPUM_0958___hemE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01725___hemE-BPUM_0958___hemE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01725___hemE-BPUM_0958___hemE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01725___hemE
# 2: BPUM_0958___hemE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1081
# Identity: 780/1081 (72.2%)
# Similarity: 780/1081 (72.2%)
# Gaps: 41/1081 ( 3.8%)
# Score: 2611.5
#
#
#=======================================
BSNT_01725___ 1 ATGAG-TAAACGAGAAACGTTTAACGAGACGTTTTTAAAAGC-TGCGCGG 48
|||.| .|||||| |..|.|||||.||.|||||.|||||.|| |||...|
BPUM_0958___h 1 ATGGGAAAAACGA-AGGCTTTTAATGACACGTTCTTAAAGGCGTGCAAAG 49
BSNT_01725___ 49 GGAGAAAAAGCGGATCACACGCCTGTGTGGTATATGAGGCAAGCAGGGCG 98
|| ||||||.|.||.||....||.|..||||||||||||||.|||||.||
BPUM_0958___h 50 GG-GAAAAAACAGACCATGTACCAGCTTGGTATATGAGGCAGGCAGGACG 98
BSNT_01725___ 99 CTCACAGCCGGAATACCGCAAGCTGAAGGAAAAGTACGGATTGTTTGAGA 148
|||||||||.|||||.||....||.||.|||||||||||..|.|||||.|
BPUM_0958___h 99 CTCACAGCCTGAATATCGTGCCCTTAAAGAAAAGTACGGGCTATTTGAAA 148
BSNT_01725___ 149 TCACACATCAGCCCGAACTTTGTGCGTATGTCACAAGACTGCCGGTTGAG 198
|.||.||||||||.||.||.|||||.|||||.|||.||||.||.||.||.
BPUM_0958___h 149 TTACGCATCAGCCAGAGCTATGTGCTTATGTAACACGACTTCCTGTAGAA 198
BSNT_01725___ 199 CAATACGGAGTCGATGCTGCAATCCTTTATAAAGATATCATGACGCCGCT 248
|||||.||.||.|||||.||.||..|.|||||||||||.|||||.|||||
BPUM_0958___h 199 CAATATGGTGTAGATGCCGCGATTTTATATAAAGATATTATGACCCCGCT 248
BSNT_01725___ 249 GCCGTCAATCGGTGTGGATGTTGAAATCAAAAACGGGATCGGTCCTGTGA 298
.||..|.||.||.|||||.||||||||.|||||.||.||.||.|||||.|
BPUM_0958___h 249 TCCAGCTATTGGAGTGGACGTTGAAATTAAAAATGGCATTGGACCTGTCA 298
BSNT_01725___ 299 TTGA-TCAGCCAATCCGGTCTCTGGCGGACATTGAAAAACTCGGCCAAAT 347
|.|| ||| ||.||.||..|....||.||.||.|||...||.||..||.|
BPUM_0958___h 299 TCGATTCA-CCGATTCGCACAAAAGCAGATATCGAACGTCTTGGGGAACT 347
BSNT_01725___ 348 TGATCCGGAACAGGACGTGCCGTACGTGCTTGAGACAATTAAACTGCTTG 397
|.||||.|||.|.|||.||||.||.||||||||.||.||| |.||||.
BPUM_0958___h 348 TCATCCAGAAGAAGACCTGCCATATGTGCTTGACACCATT---CAGCTTT 394
BSNT_01725___ 398 T---CAATGAGCAGCTGAACGTCCCGCTCATCGGTTTCTCAGGTGCGCCT 444
| .||.||||||||.||.||.|||||.||||||||..|.|||||.||.
BPUM_0958___h 395 TAACGAAGGAGCAGCTAAATGTACCGCTTATCGGTTTTGCTGGTGCACCA 444
BSNT_01725___ 445 TTTACGCTTGCAAGCTATATGATCGAAGGCGGCCCGTCGAAAAACTACAA 494
||||||.|.||.|||||||||||.|||||||||||.||.||||||||..|
BPUM_0958___h 445 TTTACGATGGCGAGCTATATGATTGAAGGCGGCCCATCTAAAAACTATCA 494
BSNT_01725___ 495 TAAAACAAAAGCCTTCATGTACAGCATGCCAGATGCATGGAATCTGCTGA 544
||||||||||||..||||||||||...|||.||..||||||..|||||.|
BPUM_0958___h 495 TAAAACAAAAGCGCTCATGTACAGTGAGCCTGAGACATGGATGCTGCTCA 544
BSNT_01725___ 545 TGTCCAAGCTTGCCGACAT---GATCATCGT--GTACGTGAAAGCGCAGA 589
||..|||..|.||.||.|| ||||| ||| .||||| ||.|||.
BPUM_0958___h 545 TGAACAAATTAGCGGATATGACGATCA-CGTACATACGT----GCCCAGG 589
BSNT_01725___ 590 TTAAGGCAGGCGCAAAAGCGATTCAAATCTTTGATTCGTGGGTCGGCGCA 639
|.||.|||||.|..|..|||.||||||||||.||.||.|||||.||||||
BPUM_0958___h 590 TAAAAGCAGGGGTCAGTGCGTTTCAAATCTTCGACTCATGGGTGGGCGCA 639
BSNT_01725___ 640 TTGAAT-CAGGCAGATTACAGAACATACATCAAACCCGTAATGAACCGGA 688
||.||| || ||.||.|||.|.||||.|||.|||||.||.|||.|.||.|
BPUM_0958___h 640 TTAAATGCA-GCGGACTACCGGACATTCATTAAACCTGTCATGCAGCGAA 688
BSNT_01725___ 689 TTTTTTCAGAGCTCGCAAAG-GAGAATGTGCCGCTGATCATGTTTGGCGT 737
||||..||||| |.|.|.|| ||.|||||.||..|||||||||..||.||
BPUM_0958___h 689 TTTTCACAGAG-TTGAAGAGTGAAAATGTACCAATGATCATGTACGGAGT 737
BSNT_01725___ 738 CGGCGCAAGCCATCTCGCAGATGATTGGCATGACCTTCCTCTCGATGTTG 787
.||.|||||||||||||...|.|||||||||||..|.||.||.||.||.|
BPUM_0958___h 738 TGGTGCAAGCCATCTCGTGAAAGATTGGCATGATTTGCCGCTAGACGTCG 787
BSNT_01725___ 788 TCGGGCTTGACTGGAGACTCGGCATTGATGAAGCCAGATCAAAAGGAATC 837
|.||.|||||.|||.|..|..|..|.||||||||..||..|.||||..||
BPUM_0958___h 788 TTGGACTTGATTGGCGTATGAGTGTAGATGAAGCACGAAAAGAAGGGCTC 837
BSNT_01725___ 838 ACTAAAACAGTGCAGGGCAACCTGGACCCGTCCATTTTGCTTGCGCCATG 887
||.|||||..|.||.||.||.||.||.||..|.||.||.|||.|.||.||
BPUM_0958___h 838 ACAAAAACGTTACAAGGAAATCTTGATCCAACAATCTTACTTTCTCCTTG 887
BSNT_01725___ 888 GGAAGTCATTGAGAAGAA--AACGAAGGAAATACTTGATCAGGGTATGAA 935
|||||||||| |||||| |.|.||.||.|||.|.|||||.||.|||||
BPUM_0958___h 888 GGAAGTCATT--GAAGAAAGAGCAAAAGACATATTAGATCAAGGGATGAA 935
BSNT_01725___ 936 ATCAGATGGCTTCATTTTCAATCTTGGCCATGGGGTATTTCCTGATG--T 983
|||||||..||||||.||.||.||.||.||||||||||||||.|||| |
BPUM_0958___h 936 ATCAGATCACTTCATCTTTAACCTAGGTCATGGGGTATTTCCAGATGTTT 985
BSNT_01725___ 984 CAGTCCCGAGGTTTTGAAAAAACTGACAGCGTTTGTCCATGAATATTCA- 1032
|| ||.||....||.||.||.|||||.|..|||.|.||.||.||||||
BPUM_0958___h 986 CA--CCAGATACGTTAAAGAAGCTGACCGATTTTATTCACGATTATTCAG 1033
BSNT_01725___ 1033 CAAAACA-AAAAAATGGGTCAATATTCCTAA 1062
|.||||| ||||||| ..||.|| ||||
BPUM_0958___h 1034 CTAAACATAAAAAAT-CATCCAT----CTAA 1059
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