Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01714 and BPUM_0952
See
Amino acid alignment /
Visit
BSNT_01714 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence dna-align/BSNT_01714___ecsB.1.24716.seq
# -bsequence dna-align/BPUM_0952___ecsB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01714___ecsB-BPUM_0952___ecsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01714___ecsB-BPUM_0952___ecsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01714___ecsB
# 2: BPUM_0952___ecsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1365
# Identity: 827/1365 (60.6%)
# Similarity: 827/1365 (60.6%)
# Gaps: 282/1365 (20.7%)
# Score: 2135.5
#
#
#=======================================
BSNT_01714___ 1 ATGAATAA--------TATGCTTGATATTTGGCAGTCGCGGCTGCAGGAG 42
||||.||| .|.|| ||||||.|.||.||..|..||||.
BPUM_0952___e 1 ATGAGTAAAACGACGCAAAGC-----ATTTGGAAATCACGATTAGAGGAA 45
BSNT_01714___ 43 CATATCAAAGAAACAAGAACATACATGAAATATATGCTCAACGATCACCT 92
||.||..||||.|||||||.|||..|.|||||.|||.||||.|||||.||
BPUM_0952___e 46 CACATACAAGATACAAGAAAATATTTAAAATACATGTTCAATGATCATCT 95
BSNT_01714___ 93 CGTCATTGTTTTGATTTTTTTTCTAGCGGGCGCTGCAAGCTGGTACAGCA 142
.||||||||..|.||||||||.||.||.||||..||.||||||||.||.|
BPUM_0952___e 96 TGTCATTGTGCTCATTTTTTTCCTTGCAGGCGGAGCGAGCTGGTATAGTA 145
BSNT_01714___ 143 AATGG---ATACGGGACATTCCCGCTCACTTTCCGTCCTTTTGGGTGATG 189
|.||| |.|| |.|||||.|||||.|||||.||||..|||||.|||
BPUM_0952___e 146 ACTGGCTCAAAC---AAATTCCAGCTCATTTTCCATCCTACTGGGTCATG 192
BSNT_01714___ 190 GCCGTGCTGTTTTCGC--TCGTGTTGACAAGCTCTTATGTGCGAACGCTT 237
||.|| |||||||.| |.||..|||||||||||||.|||||.|||.|.
BPUM_0952___e 193 GCAGT--TGTTTTCTCATTGGTACTGACAAGCTCTTACGTGCGGACGTTG 240
BSNT_01714___ 238 TTGAAGGAGGCTGACCT--TGTTTT--CTTATTGCCTCTTGAAGCAAAAA 283
.|.||.||.||.||.|| |||||| ||| |||.|.||||..|..|
BPUM_0952___e 241 ATCAAAGAAGCAGATCTCGTGTTTTTGCTT----CCTTTGGAAGGGAGGA 286
BSNT_01714___ 284 TGGAGCCTTACTTGAAGCAGGCGTTTGTCTACAGCTATGTGTCTCAGCTG 333
||||||||||.||.||.||.||.|||..||..||||...|.|||||||||
BPUM_0952___e 287 TGGAGCCTTATTTAAAACAAGCCTTTAACTTTAGCTTCATTTCTCAGCTG 336
BSNT_01714___ 334 TTTCCGCTTATTGCGCTG-AGC-ATCGTTGCGATGCCGCTTTATTTCGCA 381
|||||.||.||| |||| |.| ||.||.||..|.||||||||||..|||
BPUM_0952___e 337 TTTCCTCTCATT--GCTGTATCTATTGTCGCACTCCCGCTTTATTCGGCA 384
BSNT_01714___ 382 G-----TCACACCGGGGGCTTC--GCTCGTAT---CGTATGCCGCGGTCT 421
| |||.|| |||.|| |.| |||| |.||| .
BPUM_0952___e 385 GTGTCTTCAGAC----GGCATCAAGAT-GTATGTGCTTAT---------A 420
BSNT_01714___ 422 TTGTC-CAACTGTTGCTGCTGAAGGCGTGGAAT-CAG-GTAATGGAATGG 468
|||.| |||.||.|..||.|.||||....|||| ||| | ||..|||||
BPUM_0952___e 421 TTGGCGCAAATGATTTTGATCAAGGGACTGAATACAGCG--ATTCAATGG 468
BSNT_01714___ 469 CGCATGAC----TTTC---CAAAACGACCGCAGCATGAAACGGATGGACG 511
.|.||||| |||| .|||||.| ||||.|.||.|.||.|
BPUM_0952___e 469 AGAATGACGTATTTTCAAGGAAAACAA-------ATGAGATGGCTTGATG 511
BSNT_01714___ 512 TCA-TCATTCGCTTTGCGGC----GAATACACTCGTTCTTTATTTT---- 552
|| ||.||||.||| | ||||| |.|||||
BPUM_0952___e 512 -CAGTCCTTCGTTTT----CTATTGAATA----------TGATTTTAATC 546
BSNT_01714___ 553 ------GTTTTCCA---ATCTGTTTATATGTATGCGCTTCTCG---TCTA 590
|||||.|| ||| .||||.|..||| ..||| |.||
BPUM_0952___e 547 TATACCGTTTTACAGGCATC-----CTATGCAATCGC-AATCGTTTTTTA 590
BSNT_01714___ 591 TGTCAT-TATGGCTGTTCTTTATC-TGTATATGTCTT--CC---GCAG-C 632
|.|||| ||||| |.|.|||| |||.|| ||| || |||| |
BPUM_0952___e 591 TCTCATCTATGG----TGTCTATCTTGTTTA---CTTAACCAATGCAGTC 633
BSNT_01714___ 633 AAAACGGAAAACA----TTTAAATGGGAGAGCCATATTGAGTC---CGAA 675
|| |||.|| |||.|||||||....|||||| || ||||
BPUM_0952___e 634 AA-----AAAGCAGCCTTTTCAATGGGAATTGCATATT---TCTGACGAA 675
BSNT_01714___ 676 TTGAGACGAAAGCAGCGTTTCTATCGGATTGCCAACCTGTTTACTGATGT 725
||.|.||||||.||||||||.|||||..|.|||||..|.|||||.|||||
BPUM_0952___e 676 TTAAAACGAAAACAGCGTTTTTATCGTTTGGCCAATTTATTTACAGATGT 725
BSNT_01714___ 726 GCCGCATTTG-CGAAAGCAAGCCAAACGCAGAGCTTATCTCGACT---TT 771
|||.|||||| .|||| ||.|..|||.|.|||...|||.|.|||| ||
BPUM_0952___e 726 GCCTCATTTGAAGAAA-CAGGTGAAAAGAAGAATCTATATGGACTGGCTT 774
BSNT_01714___ 772 TTGCTGCGGCTTGTGCCGTTTGAACAGCGCAAAACATTTGCCTATATGT- 820
| |||.|.||||.||||.|||.|||||.|||||.|||.|.||.||||
BPUM_0952___e 775 T---TGCAGTTTGTTCCGTATGACCAGCGTAAAACTTTTTCTTACATGTA 821
BSNT_01714___ 821 --TCACCCGCGCCTTTTTGCGTTCGAGCGATTATTTGGGCATTCTTGTCA 868
|.| |.||.|||||.||.||.|..||.|||||.|| ||||||
BPUM_0952___e 822 TGTGA---GGGCATTTTTACGGTCAAATGACTATTTTGG---TCTTGT-- 863
BSNT_01714___ 869 GATTA-----ACGATCGTTTTCGCGCTGATCATTATGTATGTCTCAG--C 911
||||| ||...|||.||.|.|||.||.|||.||||| .||| .
BPUM_0952___e 864 GATTAGGCTTACTGCCGTGTTTGTGCTAATTATTTTGTAT---ACAGGTG 910
BSNT_01714___ 912 CAGCCCGCTGATT------GCAGCGGTTTTGACTGTGTTTGCCATTTTCA 955
||||..||||..| ||.|| |||.|| ||||..||.|.||.|
BPUM_0952___e 911 CAGCAGGCTGGGTAGGTGCGCTGC----TTGTCT-TGTTCACCGTGTTTA 955
BSNT_01714___ 956 TTACGGGCATTCAGCTTCTGCCGCTCTT--CG--GCCACTTTGACCATCT 1001
|.||.||..|.|||||..||||| || || | |||||||.|||.||
BPUM_0952___e 956 TCACAGGTGTCCAGCTAGTGCCG---TTAACGAAG-CACTTTGCCCACCT 1001
BSNT_01714___ 1002 GGCGCTTCAAGAGCTGTACCCTGT---GAAAAAAGAAACAAAGCTGAAAA 1048
..|..|.||.|..||.||.||||| ..||.||||||...|.|.| |
BPUM_0952___e 1002 TTCTTTACAGGCACTTTATCCTGTTGCTCAACAAGAAAAGGATCGG---A 1048
BSNT_01714___ 1049 GCTAT----TTCTC-TCTATTAAAAAC-TGCACTTAGTATTCAAGCG--- 1089
|||.| ||||| ||..| ||| || ||.|..||.|||.||
BPUM_0952___e 1049 GCTTTTTTATTCTCGTCCGT----AACGTG--CTCATCATCCAATCGATA 1092
BSNT_01714___ 1090 CTGCTGATGTCTGTTGCATCTGCCTATGCAGCCGGCTTGACCGGTTTTC- 1138
.|||||| .||| ||||..| ||| |||||..|| ||.|..|
BPUM_0952___e 1093 TTGCTGA--GCTG-TGCAGTT--CTA-----CCGGCAGGA--GGATGGCA 1130
BSNT_01714___ 1139 ------TGTACGCGCTGATCGGTTCTGCCGTTCTGATTT--TTG----TT 1176
||.|| .||||.||||||||| ||| ||
BPUM_0952___e 1131 GGGAAGTGGAC-------------TTGCCCTTCTGATTTCATTGGCATTT 1167
BSNT_01714___ 1177 GT--TTTGCCTGCTT------ATATG-ACAACCAG--GCTGAAAAAGCAC 1215
|| ||..||| ||| |||.| || .||| |.|.|||
BPUM_0952___e 1168 GTGCTTGTCCT-CTTCAAGCCATACGTAC--TCAGTCGATTAAA------ 1208
BSNT_01714___ 1216 GGAAAGCTGTGA--- 1227
||||.||.||
BPUM_0952___e 1209 --AAAGATGAGATAG 1221
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.