Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01706 and BPUM_0945
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_01706.1.24716.seq
# -bsequence dna-align/BPUM_0945___yhaH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01706-BPUM_0945___yhaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01706-BPUM_0945___yhaH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01706
# 2: BPUM_0945___yhaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 260/411 (63.3%)
# Similarity: 260/411 (63.3%)
# Gaps: 63/411 (15.3%)
# Score: 882.0
#
#
#=======================================
BSNT_01706 1 ATGCTGAATGAATCCTATTTTGAAGAAAAAGACGGGGTGATTGTAATGGC 50
|||||
BPUM_0945___y 1 ---------------------------------------------ATGGC 5
BSNT_01706 51 GAGCGGACGTTCTCTATTAACAGGACTATTCGTAGGCGGCATCATCGGAG 100
.||.|||||||||.|||||||||||.||||.||||||||..||.||||||
BPUM_0945___y 6 TAGTGGACGTTCTTTATTAACAGGATTATTTGTAGGCGGTCTCCTCGGAG 55
BSNT_01706 101 GAGCAGCGGTTCTTCTTACTGCACCTTCCTCAGG-AAAGCAGCTGCGTGA 149
|.||.||.||.||.||.||..|.||.||.||.|| |.|| |..||||.|.
BPUM_0945___y 56 GTGCGGCAGTGCTCCTGACGACTCCCTCTTCTGGCAGAG-ATGTGCGCGG 104
BSNT_01706 150 AAAAATGAAAACCAATTATG----ATTCTTTTGAAGAAACAATCAAACGC 195
|||.||||||..|...|||| |||| |||||.||..|.|.|.|.
BPUM_0945___y 105 AAAGATGAAAGACGGCTATGACAAATTC----GAAGATACGCTGACAAGA 150
BSNT_01706 196 TTAAAGTCAGACGGGCTTGCATTAAAAGACCA----GCTGATCAAAGCGG 241
|||||...|||.||.|..||.||||||||.|| |.|| ||.|.|
BPUM_0945___y 151 TTAAAAAGAGATGGACAAGCTTTAAAAGAGCAAATTGTTG----AAACAG 196
BSNT_01706 242 CAAAAGAAAGCACGGATGTTATTAAAGACGTGGGCGGCGAGCTCCAAACG 291
||||||||||..|.||.||.||||||||.||.||....||..|.|||||.
BPUM_0945___y 197 CAAAAGAAAGTGCAGAGGTCATTAAAGAAGTCGGAACTGAATTACAAACA 246
BSNT_01706 292 TCAATTAAAAAATGGCAGGAAGAGATCAAGCCTCACCAGCAGGATCTGCA 341
||.|||.|..||||||..|||||.|||||||||||.|||||||||.||||
BPUM_0945___y 247 TCGATTCAGCAATGGCGTGAAGAAATCAAGCCTCATCAGCAGGATTTGCA 296
BSNT_01706 342 AAAAGAAATTGCCGATATCGAAGAGAAAATCAGACAGCTGGAGAAAACCT 391
|||.||||||...||.||.||.||.||..|||..||.||.||||||||||
BPUM_0945___y 297 AAAGGAAATTCAGGAAATTGAGGAAAAGCTCAAGCAACTAGAGAAAACCT 346
BSNT_01706 392 TACAAAACTAA 402
|||||||||||
BPUM_0945___y 347 TACAAAACTAA 357
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