Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01695 and BPUM_0937
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:12
# Commandline: needle
# -asequence dna-align/BSNT_01695___yhaL.1.24716.seq
# -bsequence dna-align/BPUM_0937___yhaL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01695___yhaL-BPUM_0937___yhaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01695___yhaL-BPUM_0937___yhaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01695___yhaL
# 2: BPUM_0937___yhaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 160/243 (65.8%)
# Similarity: 160/243 (65.8%)
# Gaps: 42/243 (17.3%)
# Score: 510.5
#
#
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BSNT_01695___ 1 GTGTTATTTTTTCCATGGTGGGTGTATCTTTGTATTGTAGGCATCATTTT 50
.||||.|||||||||||||||||||||...|||||..|.|||||.|||||
BPUM_0937___y 1 ATGTTGTTTTTTCCATGGTGGGTGTATGCATGTATCATTGGCATTATTTT 50
BSNT_01695___ 51 CAGCGCATATAAACTTGTGGCGGCAGCCAAAGAGGAAGAAAAAG-TAGAC 99
|.|.||.||||||.|..||.|..|.|||||||||| ||.||.|| |.||.
BPUM_0937___y 51 CTGTGCGTATAAATTAATGACAACGGCCAAAGAGG-AGCAAGAGATTGAT 99
BSNT_01695___ 100 CAGGCTTTTATTGAAAAAGAAGGACAGATTTATATGGAGAGGATGGA--- 146
||..|.||||||||.||.||||||.||||||.|||.|||.|.|||||
BPUM_0937___y 100 CAATCCTTTATTGAGAAGGAAGGAGAGATTTTTATCGAGCGAATGGAGCA 149
BSNT_01695___ 147 --AAAG-GAGCG-AGAACGCCGCAGTTCTCAG---CAGC--ATGAAGAAG 187
|||| ||||| ||| || |||| |||| ||||| |||
BPUM_0937___y 150 AGAAAGAGAGCGCAGA----CG------TCAGGGACAGCAAATGAA-AAG 188
BSNT_01695___ 188 A-----------------AAATCAAAACCATTCCATCGCATAA 213
| |.||.||.|.||.||.||.||.|||
BPUM_0937___y 189 ATCCCAAGATTCGGCGGCACATGAAGATCACTCGATTGCTTAA 231
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