Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01688 and BPUM_0933
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:11
# Commandline: needle
# -asequence dna-align/BSNT_01688.1.24716.seq
# -bsequence dna-align/BPUM_0933.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01688-BPUM_0933.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01688-BPUM_0933.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01688
# 2: BPUM_0933
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 122/203 (60.1%)
# Similarity: 122/203 (60.1%)
# Gaps: 31/203 (15.3%)
# Score: 280.5
#
#
#=======================================
BSNT_01688 1 ATGGCTGA----TTATTTCCTTACCGTATTTGATCCTTCGGGGAACACGC 46
|||| .|| .||.||..|.||.||||||||.||.||.||..|.||..
BPUM_0933 1 ATGG-AGAAGACATACTTTTTAACTGTATTTGACCCATCCGGTGAGACTT 49
BSNT_01688 47 TGGTAAACGAGCAATTCGAGGCAGAACA-----TGAAGAAGCGGCAAAAA 91
|..||||.||..||.| ||.|||| |||.|||..||| |||
BPUM_0933 50 TATTAAATGAAAAAAT-----CACAACAGATAGTGATGAAAAGGC--AAA 92
BSNT_01688 92 CGCAT--GGTGAAGCC--CTCTTAAAAGAAAAAGAGC--TTCA--TAGTC 133
.|.|| ||| .||| |.||||..|| ||.||| |.|| .|| |
BPUM_0933 93 GGAATTAGGT--CGCCATCGCTTATTAG---AACAGCAATACACGAAG-C 136
BSNT_01688 134 ATACTCATCGTTTAGTCAATGCAGCCGGAAAGCTGATTTTGTTTCACGGA 183
||.||||||||.|.||..|||..||.||.||||||.||||.|||.|..|.
BPUM_0933 137 ATTCTCATCGTCTCGTTGATGATGCAGGCAAGCTGCTTTTATTTGAACGT 186
BSNT_01688 184 TGA 186
|.|
BPUM_0933 187 TAA 189
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