Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01677 and BPUM_0928
See
Amino acid alignment /
Visit
BSNT_01677 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_01677___yheA.1.24716.seq
# -bsequence dna-align/BPUM_0928___yheA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01677___yheA-BPUM_0928___yheA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01677___yheA-BPUM_0928___yheA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01677___yheA
# 2: BPUM_0928___yheA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 362
# Identity: 269/362 (74.3%)
# Similarity: 269/362 (74.3%)
# Gaps: 13/362 ( 3.6%)
# Score: 993.0
#
#
#=======================================
BSNT_01677___ 1 ATGGCTGTTAATTTTTATGATGTAGCGTATGATCTGGAAAATGCATTACG 50
|||.||||.|||.||||||||||.||.|||||.||.|||||.|||.|.||
BPUM_0928___y 1 ATGTCTGTAAATGTTTATGATGTTGCATATGACCTTGAAAAAGCACTGCG 50
BSNT_01677___ 51 TGGGAGCGAAGAGT--TCACCCGTTTAAAAAACCTTTACGACGAAGTTAA 98
|...||||||||.| |||.| |.|||||||.|||||.||.||.|||||
BPUM_0928___y 51 TCATAGCGAAGAATACTCAAC--TCTAAAAAATCTTTATGATGAGGTTAA 98
BSNT_01677___ 99 CGCAGATGAATCAGCGAAGCGCATGTTCGAAAACTTCCGTGATGTACAGC 148
|||.|||||.||..|.||..|.||||||||.|||||||||||..|.||..
BPUM_0928___y 99 CGCGGATGAGTCCTCTAAAAGAATGTTCGAGAACTTCCGTGACATTCAAG 148
BSNT_01677___ 149 TTAGACTCCAGCAAAAACAAATGGCAGGAGAAGAGATTACACAAGAAGAA 198
|.|..||.||.|||||.||||||.|.||..|||||||.||||||||||||
BPUM_0928___y 149 TAAACCTTCAACAAAAGCAAATGACTGGTCAAGAGATCACACAAGAAGAA 198
BSNT_01677___ 199 GTGACGCAGGCTCAAAAAACAGTTGCGCTTGTACAGCAGCACGAAAAAAT 248
|||..|||.||.|||||||||||.||.|||||.||.||||||||.|||||
BPUM_0928___y 199 GTGGAGCAAGCACAAAAAACAGTGGCACTTGTTCAACAGCACGATAAAAT 248
BSNT_01677___ 249 TTCTCAGCTGATGGAAGCGGAGCAGCGCATGAGCATGCTGATTGGTGAAT 298
.||||||.||||||||||.||.||.||..||||..|.||.||.||.||||
BPUM_0928___y 249 CTCTCAGTTGATGGAAGCAGAACAACGTGTGAGTGTTCTCATCGGAGAAT 298
BSNT_01677___ 299 TGAACAAAATCATTATGAAGCCTTTAGAAGAGCTTTACGGCAGTGTTGAA 348
|.||.|||.|.||.|||||||||.|.|||||||||||.||.|.|...|||
BPUM_0928___y 299 TAAATAAAGTGATCATGAAGCCTCTTGAAGAGCTTTATGGGAATCCAGAA 348
BSNT_01677___ 349 GGCTAA------ 354
| ||
BPUM_0928___y 349 G---AAAATTAA 357
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.