Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01672 and BPUM_0924
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_01672___yheE.1.24716.seq
# -bsequence dna-align/BPUM_0924.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01672___yheE-BPUM_0924.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01672___yheE-BPUM_0924.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01672___yheE
# 2: BPUM_0924
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 153/221 (69.2%)
# Similarity: 153/221 (69.2%)
# Gaps: 22/221 (10.0%)
# Score: 475.0
#
#
#=======================================
BSNT_01672___ 1 ATGATTTCTCA-TTTCAGCTGGAAACCTTTGTTCCCAAAAGAAAAGCTGC 49
||||||||||| ||||| .|||||||||.|.||...|||||.|.|..|||
BPUM_0924 1 ATGATTTCTCATTTTCA-ATGGAAACCTCTCTTTAAAAAAGCACAATTGC 49
BSNT_01672___ 50 CCGGATGGAAAATTTCATTTTATTATAAAGGGACCCATTATGAAGGCATC 99
|.||.||||||||.||.||||.|.|.||.||..|.||.||.|||||.|||
BPUM_0924 50 CAGGGTGGAAAATATCCTTTTTTCACAATGGTGCACACTACGAAGGTATC 99
BSNT_01672___ 100 TATCATAAGAGCGGTGAGATTGAATGGGG-----AGACTTGTTTCCCGCC 144
||.||.||.|..|||||.||||||||||| || ||| |||||
BPUM_0924 100 TACCACAAAACAGGTGATATTGAATGGGGCTCTCAG-CTT-----CCGCC 143
BSNT_01672___ 145 CGCGC-TGA---CGAGCCTGCTCTTACAA-ACGAGATACATGAACTGATG 189
| | ||| |||.||..| ||||.|| |.||.||.||.|||.|.|||
BPUM_0924 144 C---CATGAAGTCGAACCAAC-CTTAAAAGAAGAAATCCACGAATTAATG 189
BSNT_01672___ 190 CTTTTTCATATTTATGACTAG 210
||.||.|||.|.|||||.||.
BPUM_0924 190 CTGTTCCATGTCTATGATTAA 210
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