Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01668 and BPUM_0921
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_01668___sspB.1.24716.seq
# -bsequence dna-align/BPUM_0921___sspB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01668___sspB-BPUM_0921___sspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01668___sspB-BPUM_0921___sspB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01668___sspB
# 2: BPUM_0921___sspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 165/211 (78.2%)
# Similarity: 165/211 (78.2%)
# Gaps: 14/211 ( 6.6%)
# Score: 652.0
#
#
#=======================================
BSNT_01668___ 1 ATGGCTAA--CCAAAACTCTTCAAATGACTTGCTAGTTCCTGGCGCAGCT 48
|||||||| |.||.| .|||||||.|.||.|||||||||||.||||..
BPUM_0921___s 1 ATGGCTAATTCTAATA--GTTCAAATCAATTACTAGTTCCTGGAGCAGAG 48
BSNT_01668___ 49 CAGGCTATCGATCAAATGAAACTTGAAATCGCTTCTGAATTCGGCGTTAA 98
||.||.|||||||||||||||...|||||||||||||||||.||||||||
BPUM_0921___s 49 CAAGCAATCGATCAAATGAAATACGAAATCGCTTCTGAATTTGGCGTTAA 98
BSNT_01668___ 99 CCTTGGAGCGGACACAACTTCTCGCGCTAACGGTTCTGTCGGAGGAGAAA 148
|||||||||.||.||.||..||||||||||||||||.||.||.|||||||
BPUM_0921___s 99 CCTTGGAGCAGAAACTACAGCTCGCGCTAACGGTTCAGTTGGTGGAGAAA 148
BSNT_01668___ 149 TCACAAAACGTTTAGTATCTTTCGCTCAGCAGCAAATGGGCGGCAGAGTT 198
|||||||||||.|.||.||||.||||||.||.||.|||||.||.|
BPUM_0921___s 149 TCACAAAACGTCTTGTGTCTTACGCTCAACAACACATGGGTGGAA----- 193
BSNT_01668___ 199 CAA-----TAA 204
||| |||
BPUM_0921___s 194 CAAAAGCTTAA 204
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