Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01666 and BPUM_0920
See
Amino acid alignment /
Visit
BSNT_01666 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_01666___yheG.1.24716.seq
# -bsequence dna-align/BPUM_0920___yheG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01666___yheG-BPUM_0920___yheG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01666___yheG-BPUM_0920___yheG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01666___yheG
# 2: BPUM_0920___yheG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 694
# Identity: 398/694 (57.3%)
# Similarity: 398/694 (57.3%)
# Gaps: 149/694 (21.5%)
# Score: 985.5
#
#
#=======================================
BSNT_01666___ 1 ATGAAAATCGCTTTATTAGGAGC-CAGCGGCCGCGTCGGACAAGCCTT-- 47
||||||||.|||.|.||.||.|| || .||.||.||.||||||||.||
BPUM_0920___y 1 ATGAAAATAGCTCTTTTCGGTGCTCA-TGGACGTGTAGGACAAGCATTTC 49
BSNT_01666___ 48 ----TTTAACACAAGCTGCAGCAGATGAAAGATTTGATATTTTCGCTC-- 91
|||.|..|| ||.||||||..| ||..||| .||||.||
BPUM_0920___y 50 TTCGTTTCATTCA------AGTAGATGATCG-TTACATA-GTTCGTTCAT 91
BSNT_01666___ 92 TGA-TCAGATCTCAA--------------CATGCTGATTTTCCCCTTTCA 126
||| ||.|| ||| |.|||.|.|.| .|||||
BPUM_0920___y 92 TGATTCGGA---CAAACCGAGAAGAAATGCTTGCGGGTAT----GTTTCA 134
BSNT_01666___ 127 AAAGAC----------AGAACCATCATGGGGAACGCCCGCCGCTTAGAAG 166
|...|| |||| ||| .|||.|
BPUM_0920___y 135 AGTCACCGGCAATTCAAGAA--ATC-------------------GAGATG 163
BSNT_01666___ 167 ATG----TGAAAAAAATAATGGAGAATGCTGAAATCGTGATCAGCTGTCT 212
||| |||.|.||..||.||| ||.||.||.||..|.||||||||
BPUM_0920___y 164 ATGTGCTTGAGACAATCAAAGGA----GCAGATATTGTTGTGAGCTGTCT 209
BSNT_01666___ 213 AGGCACAGATGGTGATGATACCTTGTCAACTGCTATGGCACACATTCTCT 262
|...|||||||||||||||||.||.||...|.|.||||..||.||..|..
BPUM_0920___y 210 ATCGACAGATGGTGATGATACATTATCTGTTTCAATGGAGCATATCGTAC 259
BSNT_01666___ 263 CCGCTATGGAGGAACAGCATATCAA-------ACGGCTTATTACGATCGG 305
..||.|||.||.| ||||| |||..|||||||.||.||
BPUM_0920___y 260 AAGCCATGAAGCA-------ATCAAATACATCACGAATTATTACAATAGG 302
BSNT_01666___ 306 CACCGCAGGGATCCTAGATTCCCGATATGAACCGGGGAAATACCGGTTTG 355
.||.|||||.||..||.|..|..|..|..|.||||.|...|||||.||||
BPUM_0920___y 303 TACGGCAGGCATTTTAAAAGCAAGGCAGCAGCCGGAGCTTTACCGTTTTG 352
BSNT_01666___ 356 AAACAAATGAATCGAAACGAAAGCAGA------CCCGCGCAGCCAAGGAG 399
||||||||||||| |||||.|| ||||.|||||.||||||
BPUM_0920___y 353 AAACAAATGAATC------AAAGCGGACCACTTCCCGAGCAGCTAAGGAG 396
BSNT_01666___ 400 CATGCAAAAGTATACGAAATGCTTAAA--GAATCATCATTAGACTGGACA 447
|||||.||||..|..|||.|.|||.|| ||.|.|| |||||.|||||.
BPUM_0920___y 397 CATGCCAAAGCGTTTGAACTCCTTCAATCGACTGAT--TTAGATTGGACC 444
BSNT_01666___ 448 ATCATCTGCCCCACTTACCTCCCGGACGGAACAGCAAC-CGGCGTT--TA 494
||.||.||.||.||.||..|.||.||.|||..||..|| ||| | ||
BPUM_0920___y 445 ATTATTTGTCCAACCTATTTACCAGATGGAGAAGTGACACGG---TCATA 491
BSNT_01666___ 495 TCG-TACGGAGCGTAACG---TTTTGCCT---GAGGGCGGCACAAG--CA 535
||| || .||| ||.| ||.|.||| ||.|| .||| .|
BPUM_0920___y 492 TCGCTA-TGAG---AAAGATTTTCTCCCTATAGATGG-----AAAGAAAA 532
BSNT_01666___ 536 TTTCGGTCGGCGATACTGCGGACTTTTTATATCGTGAGCTCGTTACAGGT 585
||||.||.|..||.||.||..|||||||||||| ||| .||||.|...
BPUM_0920___y 533 TTTCAGTTGAAGACACCGCACACTTTTTATATC---AGC-AGTTAAATTC 578
BSNT_01666___ 586 GA--------GTATGTCGGATACCGTGTCGGACTGGCTTATTGA 621
|| |||..|| |.||.|||||..|.||.||.|.|
BPUM_0920___y 579 GAAGGAATTTGTACATC----AACGCGTCGGTATTGCCTACTAA 618
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.