Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01665 and BPUM_0919
See
Amino acid alignment /
Visit
BSNT_01665 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_01665___yheH.1.24716.seq
# -bsequence dna-align/BPUM_0919___yheH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01665___yheH-BPUM_0919___yheH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01665___yheH-BPUM_0919___yheH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01665___yheH
# 2: BPUM_0919___yheH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2176
# Identity: 1385/2176 (63.6%)
# Similarity: 1385/2176 (63.6%)
# Gaps: 317/2176 (14.6%)
# Score: 4103.0
#
#
#=======================================
BSNT_01665___ 1 ATGAAAATAGGAAAAA----CGTTATGGAGATACGCACTTCTTTAT-CGA 45
||||.||.|||||.|| |.|| |..||||||||.|||||| .||
BPUM_0919___y 1 ATGACAACAGGAAGAAGACTCCTT----ACCTACGCACTCCTTTATAAGA 46
BSNT_01665___ 46 AA--ATTG-CTGATCACAGCCGTCCTTTTGCTAACTGTTGCCGTCGGTGC 92
|| |.|| |||.| |||.|..|.||.||.|...||||.||.|||||
BPUM_0919___y 47 AAGTACTGTCTGTT----GCCTTGATCTTTCTCATCATTGCAGTAGGTGC 92
BSNT_01665___ 93 AGAACTGACTGGGCCCTTTATTGGCAAAAAAATGATAGACGACCATATCC 142
.||||||||.||.||.||||||||.||.||||||||.||.||.|||||..
BPUM_0919___y 93 TGAACTGACAGGACCATTTATTGGGAAGAAAATGATTGATGATCATATTT 142
BSNT_01665___ 143 TCGGCATTG-AGAAAA--CAT-------GGT--ATGAAGCTGCGGAAAA- 179
|.|| || |||||| ||| ||| ||||| ||||
BPUM_0919___y 143 TAGG---TGTAGAAAAGCCATATGTCGAGGTCAATGAA-------AAAAC 182
BSNT_01665___ 180 AGATAAAAATGCCGTTCAGTTTCACGGCGTCTCA------TATGTCAGAG 223
|||.|||| |||||.|.|..||.|| | |||.|..||.
BPUM_0919___y 183 AGACAAAA---CCGTTTATTACCAGGG------AAATAACTATATACGAA 223
BSNT_01665___ 224 AGGACCGATTGCAGGAGCCTGT---------TTCAAAAGCAAAAGAAGCG 264
..||.||||| ||.|.|| |.| |.||||.||
BPUM_0919___y 224 CCGATCGATT-----AGACAGTGATATGGAATCC----GGAAAACAA--- 261
BSNT_01665___ 265 CATATTTATCAA----------GTGGGAATGGCGTT-CTATTTTGTTGAT 303
||||| ||.|||.|.| ||| |||||||||..||
BPUM_0919___y 262 -------ATCAATGTGGTGCAGGTCGGATTCG-GTTACTATTTTGTGAAT 303
BSNT_01665___ 304 CAGGCTGTCAGCTTCGACGGGAATAGAACGGTTTCTGACGGGA--AGCTG 351
.||.|..|..||||.||.||.||..|||.|.|.||.| |||| ||||.
BPUM_0919___y 304 GAGCCGATTCGCTTTGATGGAAACCGAAAGATATCGG--GGGATCAGCTT 351
BSNT_01665___ 352 ACGATCACAAAAGGAGACAAGAGC-CG-GGCATATGCTGCC--GAAAAGC 397
||.||...|||.| ||.|||||| || |.|.||| | |.|.|||
BPUM_0919___y 352 ACCATTGAAAATG--GAAAAGAGCGCGAGACCTAT-----CAAGTACAGC 394
BSNT_01665___ 398 ---TGACTAAGCAGGAACTTTTCCAGTTCTATCAGCCGGAAATAAAGGGA 444
|..|.||..|||||.|||||...||.|||.||||.|||||.|..||.
BPUM_0919___y 395 GTTTATCAAAAGAGGAAATTTTCTCTTTTTATGAGCCTGAAATTAGTGGT 444
BSNT_01665___ 445 ATGGTGTTACTGATCTGCCTG--------TAT-GGGGGCTTGCTTGTGTT 485
.||||| |.||.|| ||| ..|||||| ||.||..|
BPUM_0919___y 445 TTGGTG--------CAGCTTGTTCTATTTTATCTAGGGCTT-CTCGTTAT 485
BSNT_01665___ 486 TTCGGTATTCTTTCAATACGGACAGCATTATCTGCTGCAGATGAGCGCCA 535
|.||.|.|||||||||||.|..||||||||..||||.|||...|..||.|
BPUM_0919___y 486 TGCGATTTTCTTTCAATATGCGCAGCATTACTTGCTACAGCGAATAGCTA 535
BSNT_01665___ 536 ATCGGATTATTCAAAAGATGAGGCAGGACGTGTTTTCGCACATACAGAGT 585
|.||.|||||||||||.||||||...||.||.|||..|||.||.||.|..
BPUM_0919___y 536 ACCGAATTATTCAAAAAATGAGGGTTGATGTATTTGAGCATATTCAAACA 585
BSNT_01665___ 586 ATGCCGATTCGCTATTTTGACAACCTTCCGGCCGGAAAAGTCGTTGCGCG 635
.|.||.||.||.||||||||.||..|.|||||.|||||.|||||.||..|
BPUM_0919___y 586 TTACCTATCCGATATTTTGATAATTTACCGGCTGGAAAGGTCGTAGCTAG 635
BSNT_01665___ 636 GATTACCAATGATACGGAGGCTATCAGGGATTTATATGTCACAGTGCTTT 685
||||||||||||.||.||..|.||..|.|||||||||||.|||||.||..
BPUM_0919___y 636 GATTACCAATGACACTGAAACCATTCGTGATTTATATGTGACAGTTCTCG 685
BSNT_01665___ 686 CAACATTTGTGACAAGCGGAATCTATATGTTCGGG----ATATTCACGGC 731
|.|..||||||||.||.|..||.||.|||.|.||| ||||| ||
BPUM_0919___y 686 CCAATTTTGTGACGAGTGCGATTTACATGATTGGGATTTATATT----GC 731
BSNT_01665___ 732 TTTGTTTCTGCTTGATGTGAAGCTTGCGTTTGTATGTCTGGCAATT---- 777
..|||||.|..|..||||||||||.||..||.|.|||.||| |
BPUM_0919___y 732 CATGTTTTTATTAAATGTGAAGCTGGCACTTATTTGTTTGG----TGGCG 777
BSNT_01665___ 778 GTGCCGATTATCTGGCTGTGGTCTGTCATATACCGGAGATATGCGTCATA 827
||.||||||||.|..||.|||||..|.|..|||.|.|..|.|||.||...
BPUM_0919___y 778 GTACCGATTATTTTCCTATGGTCAATGACCTACAGAAAGTTTGCATCGGT 827
BSNT_01665___ 828 TTACAACCAAAAAATCCGCTCGATCAACAGTGACATTAACGCAAAAATGA 877
|||||||||....||.||.||.||||..|||||.||.||.||.||..|.|
BPUM_0919___y 828 TTACAACCACCGCATTCGTTCAATCATTAGTGATATCAATGCCAAGCTAA 877
BSNT_01665___ 878 ATGAGTCAATTCAAGGCATGACCATTATTCAGGCTTTCCGCCATCAAAAG 927
||||..|.||||||||.||||||||||||||.||.||.||.|||
BPUM_0919___y 878 ATGAAGCCATTCAAGGAATGACCATTATTCAAGCGTTTCGTCAT------ 921
BSNT_01665___ 928 GAAACAATGAGAGAATTTGAGGAATTAAATG-----------AATCACAT 966
||||.|.|||.|.|| ||||||||..||| ||||||
BPUM_0919___y 922 GAAAAAGTGACAAAA---GAGGAATTCGATGAGCTGAACAACAATCAC-- 966
BSNT_01665___ 967 TTTTATTTCCAAAACAG-----GATGCTGAATTTAAACTC-CTTAATGTC 1010
||||.|.|.||| ||||||..|||||||.|| ||| .|.||
BPUM_0919___y 967 -----TTTCGATATCAGCGAAAGATGCTTCATTTAAATTCACTT-CTATC 1010
BSNT_01665___ 1011 CCATAATTTGGTCAATGTCATCCGCAATCTTGCGTTCGTCTGTCTGATCT 1060
.|||||.|||||.||..|..|.||.|||.|.||.|.|||....||.||.|
BPUM_0919___y 1011 ACATAACTTGGTTAACCTGCTTCGAAATTTAGCCTACGTGGCACTTATTT 1060
BSNT_01665___ 1061 GGCATTTTGGCGGTGCGAGCCTGAA-TGCGGCCGGGATTGTTTCTATCGG 1109
||.|||||||||||||| .|.|.|| ||||.|.|||||.||.||.||.||
BPUM_0919___y 1061 GGTATTTTGGCGGTGCG-TCTTTAAGTGCGACGGGGATAGTGTCGATTGG 1109
BSNT_01665___ 1110 TGTGCTGTACGCGTTTGTCGATTATTTGAACCGGTTATTTCAGCCGATCA 1159
||||||.||.|||||||||||||||||.||.||.||||||||||||||.|
BPUM_0919___y 1110 TGTGCTTTATGCGTTTGTCGATTATTTAAATCGATTATTTCAGCCGATTA 1159
BSNT_01665___ 1160 CAGGCATCGTCAATCAGTTTTCAAAGCTGGAGCTT-------GCAAGGGT 1202
|||||||.||.||.||.|| ||.|||.|| |||.||||
BPUM_0919___y 1160 CAGGCATTGTGAACCAATT-------CTCGAGATTAGAATTAGCACGGGT 1202
BSNT_01665___ 1203 CTCCGCCGGGCGTGTTTT------------TGAACTGCTTGAAGAAAAGA 1240
.||..|.|...|.||||| ||||| |..|||.||.||
BPUM_0919___y 1203 TTCATCAGAAAGGGTTTTCAGATTATTGGATGAAC--CAGGAACAACAG- 1249
BSNT_01665___ 1241 ATACGGAAGAACCGGGT-------GAACCGGCGAAGGAGCGCGCGCTGGG 1283
.||||||||| .|| |||..| ||||||
BPUM_0919___y 1250 ---TGGAAGAACC-TGTCCATAAGGAAATG--GAAGGA------------ 1281
BSNT_01665___ 1284 GCGGGTTGAATTTCGTGATGTGTCATTTGCGTATCAAGAAGGTGAAG-AG 1332
|..|||.|.||.|..|||||..|.|||||.|||.|.||||| |||| |.
BPUM_0919___y 1282 -CACGTTCAGTTCCAAGATGTCACCTTTGCTTATAATGAAGG-GAAGAAT 1329
BSNT_01665___ 1333 GTATTAAAGCGTATTTCCTTTACTGCGCAAAAAGGCGAAACCGTAGCGCT 1382
|||||||||...|||.|.||....||..||||||||.|.||.||.||.||
BPUM_0919___y 1330 GTATTAAAGAACATTACATTCGAGGCCAAAAAAGGCCAGACAGTTGCACT 1379
BSNT_01665___ 1383 CGTCGGCCATACCGGATCAGGAAAAAGCTCGATTTTGAATCTGCTGTTTC 1432
.||.||.|||||.|||||.||.|||||||||||..||||..|||||.|||
BPUM_0919___y 1380 TGTGGGGCATACTGGATCTGGGAAAAGCTCGATCATGAACTTGCTGCTTC 1429
BSNT_01665___ 1433 GTTTTTATGATGCGCAAAAAGGTGATGTCTTAATTGATGGAAAAAGCATT 1482
||||||||||....||..||||.||..|..|.||||||||..||||||||
BPUM_0919___y 1430 GTTTTTATGACATTCAGCAAGGAGACATTCTCATTGATGGGGAAAGCATT 1479
BSNT_01665___ 1483 TA-CAACATGTCAAGACA--------GGAACTCAGATCCCATATGGGCAT 1523
|| |..|| |||..|.|| |||| .||.||||||||
BPUM_0919___y 1480 TATCGCCA-GTCCCGGCAAACGTTGCGGAA--------ACAAATGGGCAT 1520
BSNT_01665___ 1524 TGTGCTTCAGGACCCGTACTTATTCTCGGGTACAATCGGATCTAACGTAA 1573
.||.|||||.||||||||.|||||.||.||.||.||.|.|||.||.||.|
BPUM_0919___y 1521 CGTACTTCAAGACCCGTATTTATTTTCTGGAACGATTGCATCCAATGTTA 1570
BSNT_01665___ 1574 GTCT--GG--ATG----------ACGAAAGAATGACTGAAGAAGAAATAA 1609
| || || ||| ||||.| ||.||.||||..|..|.|||
BPUM_0919___y 1571 G-CTTAGGAAATGAAGACATTAAACGAGA-AACGATTGAATCATCATTAA 1618
BSNT_01665___ 1610 AAAATGCACTGCGGCAAGTCGGTGC---TGAGCCTCTTCTT-AAGAAGCT 1655
|| |||||.||.|| .||| ||.|| |||.|.||
BPUM_0919___y 1619 AA------------CAAGTAGGCGCAGTAGAG----TTATTGAAGCACCT 1652
BSNT_01665___ 1656 TCC-GAAGGGCA-TTAATGAGCCCGTGATTGAAAAAGGCAGCACGCTATC 1703
.|| ||||| | ||.||||.||.||..|||||||.||.|||||.||.||
BPUM_0919___y 1653 ACCAGAAGG--ATTTGATGAACCGGTCGTTGAAAAGGGAAGCACTCTTTC 1700
BSNT_01665___ 1704 CTCTGGAGAGCGGCAGTTAATTTCTTTCGCTAGAGCTTTGGCGTTTGATC 1753
|||.||.||.||.|||||||||||.||.|||.|.||..|.||||..||||
BPUM_0919___y 1701 CTCAGGGGAACGTCAGTTAATTTCATTTGCTCGTGCACTAGCGTACGATC 1750
BSNT_01665___ 1754 CCGCGATCTTGATTTTAGATGAGGCAACGGCGCATATTGATACAGAGACA 1803
|.||||||||.|||||||||||.||.||.||..|.|||||||||||.|||
BPUM_0919___y 1751 CAGCGATCTTAATTTTAGATGAAGCCACTGCAAACATTGATACAGAAACA 1800
BSNT_01665___ 1804 GAGGCCGTGATCCAGAAGGCGCTTGATGTCGTCAAACAAGGACGCACCAC 1853
||.||..|.||.|||...|||||.||||||||.|||.|||||||.||.||
BPUM_0919___y 1801 GAAGCGATCATTCAGCGAGCGCTGGATGTCGTTAAAGAAGGACGAACAAC 1850
BSNT_01665___ 1854 CTTCGTCATCGCTCACCGGCTTTC-AACAATCAGAAATGCTGATCAGATT 1902
.||.||.||.||||||||..|.|| |.||.|.||||| ||.|||..||||
BPUM_0919___y 1851 GTTTGTTATTGCTCACCGATTATCTACCATTAAGAAA-GCCGATATGATT 1899
BSNT_01665___ 1903 TTGGTTCTTGATAAAGGAGAAATTGTTGAGAGAGGGAACCACGAGGAATT 1952
||||||.|.||.|||||.||||||||.|||.|.||.|..||.||..||.|
BPUM_0919___y 1900 TTGGTTTTAGAAAAAGGTGAAATTGTCGAGCGGGGTAGTCATGATCAACT 1949
BSNT_01665___ 1953 GATG--GCATTAGAAGGCCGATATTATCAAATGTATGAACTGCAAAAGGG 2000
.||| ||| ||||||.|.||||...||||||||.|||||||||||.||
BPUM_0919___y 1950 CATGCAGCA--AGAAGGGCTATATGCGCAAATGTACGAACTGCAAAAAGG 1997
BSNT_01665___ 2001 ACAGAAACATTCCATTGCATAA---- 2022
|.|..|.||| ||
BPUM_0919___y 1998 ---------TGCTGTGGCA-AACTAG 2013
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.