Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01651 and BPUM_0912
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_01651.1.24716.seq
# -bsequence dna-align/BPUM_0912___yhdX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01651-BPUM_0912___yhdX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01651-BPUM_0912___yhdX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01651
# 2: BPUM_0912___yhdX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity: 85/144 (59.0%)
# Similarity: 85/144 (59.0%)
# Gaps: 42/144 (29.2%)
# Score: 346.5
#
#
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BSNT_01651 1 ATGATCCTTTATAATAGCAAAAAAGGAGGCGAGATCATGGGAAAAGGGAG 50
.||||.||||||||
BPUM_0912___y 1 ------------------------------------TTGGGTAAAGGGAG 14
BSNT_01651 51 AATCAGAGTGGAGGAAAGAATTAAAGCCGAAACGGATGCTGAAATGCAAA 100
|||.||||||||.|||.|.|||||.|.|||||||||||||||||||...|
BPUM_0912___y 15 AATTAGAGTGGAAGAACGTATTAAGGTCGAAACGGATGCTGAAATGTTTA 64
BSNT_01651 101 AAGCAACTCTCCTTGATCAGACACAAACGAAAAAAGGTAAGTGA 144
||||.|||||||||||||||.|.||.|.|||||| |||.
BPUM_0912___y 65 AAGCGACTCTCCTTGATCAGGCTCAGAAGAAAAA--GTAG---- 102
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