Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01651 and BPUM_0912

See Amino acid alignment / Visit BSNT_01651 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence dna-align/BSNT_01651.1.24716.seq
#    -bsequence dna-align/BPUM_0912___yhdX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01651-BPUM_0912___yhdX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01651-BPUM_0912___yhdX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01651
# 2: BPUM_0912___yhdX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:      85/144 (59.0%)
# Similarity:    85/144 (59.0%)
# Gaps:          42/144 (29.2%)
# Score: 346.5
# 
#
#=======================================

BSNT_01651         1 ATGATCCTTTATAATAGCAAAAAAGGAGGCGAGATCATGGGAAAAGGGAG     50
                                                         .||||.||||||||
BPUM_0912___y      1 ------------------------------------TTGGGTAAAGGGAG     14

BSNT_01651        51 AATCAGAGTGGAGGAAAGAATTAAAGCCGAAACGGATGCTGAAATGCAAA    100
                     |||.||||||||.|||.|.|||||.|.|||||||||||||||||||...|
BPUM_0912___y     15 AATTAGAGTGGAAGAACGTATTAAGGTCGAAACGGATGCTGAAATGTTTA     64

BSNT_01651       101 AAGCAACTCTCCTTGATCAGACACAAACGAAAAAAGGTAAGTGA    144
                     ||||.|||||||||||||||.|.||.|.||||||  |||.    
BPUM_0912___y     65 AAGCGACTCTCCTTGATCAGGCTCAGAAGAAAAA--GTAG----    102


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