Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01640 and BPUM_0903
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:08
# Commandline: needle
# -asequence dna-align/BSNT_01640___yhdO.1.24716.seq
# -bsequence dna-align/BPUM_0903___plsC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01640___yhdO-BPUM_0903___plsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01640___yhdO-BPUM_0903___plsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01640___yhdO
# 2: BPUM_0903___plsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 619
# Identity: 442/619 (71.4%)
# Similarity: 442/619 (71.4%)
# Gaps: 35/619 ( 5.7%)
# Score: 1482.0
#
#
#=======================================
BSNT_01640___ 1 ATGTATAAGTTTTGTGCAAATGCTTTAAAAGTTATTCTTT-CTCTTCGCG 49
||||||||.||||..|...||.|..|.|||| ||||.||| |||||||.|
BPUM_0903___p 1 ATGTATAAATTTTCAGGTTATACCATTAAAG-TATTATTTACTCTTCGAG 49
BSNT_01640___ 50 GAGGAGTGAAGGTGTATAACAAAGAAAACCTTCCGGCCGATTCAGGTTTT 99
|.|||.|.||.||.|||.|.|.|||.||.||.||..|.|||...||.|||
BPUM_0903___p 50 GCGGAATCAAAGTATATCAAAGAGAGAATCTGCCAACGGATCGGGGATTT 99
BSNT_01640___ 100 GTCATCGCGTGTACACATTCCGGCTGGGTTGATGTGATTACACTCGGAGT 149
|||||.||.|||||||||...||.|..||.|||||..||.||.|.||.|.
BPUM_0903___p 100 GTCATTGCATGTACACATGAGGGTTTTGTGGATGTTCTTGCATTAGGCGC 149
BSNT_01640___ 150 CGGGATTCTTCCTTATCAAATACACTACATGGCGAAAAAAGAGCTTTTTC 199
.|||||||||||.|.|.|.||.||||||||||||||||||||..|.|||.
BPUM_0903___p 150 AGGGATTCTTCCATTTGAGATCCACTACATGGCGAAAAAAGAATTGTTTG 199
BSNT_01640___ 200 AAAATAAATGGATCGGTTCGTTTCTGAAGAAAATTCATGCTTTTCCGGTA 249
.||||||||||||||||...|||.|.|||||.||||||||.|||||.||.
BPUM_0903___p 200 CAAATAAATGGATCGGTGGATTTTTAAAGAAGATTCATGCCTTTCCAGTT 249
BSNT_01640___ 250 GATCGGGAAAATCCCGGGCCAAGCAGTATTAAAACGCCGATTAAGCTGCT 299
|||||.||.|||||.|||||||||||||||||||||||.|||||..|..|
BPUM_0903___p 250 GATCGAGAGAATCCTGGGCCAAGCAGTATTAAAACGCCCATTAAATTATT 299
BSNT_01640___ 300 GAAAGAAGGAGAGATCGTCGGTATCTTCCCAAGCGGAACAAGAACCTCTG 349
.|||||.|||.|.|||||.||.||.||.||||||||||||.|.||..|.|
BPUM_0903___p 300 AAAAGAGGGAAAAATCGTTGGGATTTTTCCAAGCGGAACACGTACAACAG 349
BSNT_01640___ 350 AGGATGTGCCTTTGAAAAGAGGTGCGGTGACGATTGCGCAAATGGGGAAA 399
|.|||||.|||||.||||||||||||||.||.||||||||..|.||.|||
BPUM_0903___p 350 AAGATGTACCTTTAAAAAGAGGTGCGGTTACCATTGCGCAGCTTGGTAAA 399
BSNT_01640___ 400 GCGCCGCTTGTCCCCGCTGCATATC--AGGGCCCTTCAA-GCGGAAAAGA 446
|||||..|.|||||.||.||.|| | |||.||.|.||| || .|||||.
BPUM_0903___p 400 GCGCCAATCGTCCCAGCAGCGTA-CAAAGGACCGTCCAATGC-AAAAAGT 447
BSNT_01640___ 447 ATTATTCAAAAAAGGAAAAATGAAGC-TGATTATCGGTGAGCCTCTTCAC 495
.|| ||.|||||.||||||||| .|| |.|||||||||.|.||..||.|.
BPUM_0903___p 448 CTT-TTTAAAAAGGGAAAAATG-CGCTTAATTATCGGTAAACCGATTGAG 495
BSNT_01640___ 496 CAGGCTGATTTTGCCCACCTGCCTTCAAAGGAAAGACTTGCAGCAATGAC 545
|||.|.||.||||..||.||.||..||||.|||.||.|.|..||.|||||
BPUM_0903___p 496 CAGTCAGAATTTGAGCATCTACCGCCAAAAGAACGATTAGGTGCCATGAC 545
BSNT_01640___ 546 AGAGGCTTT--------GAATCAGCGGATTAAAGAACTAGA----GAATA 583
|||.|.||| ||||| ||.|||||.|| .|||.
BPUM_0903___p 546 AGAAGTTTTAAACACAAGAATC--------AAGGAACTTGAAGCTCAATT 587
BSNT_01640___ 584 AACTTG--ATCAGCTATAA 600
|| || |..||| ||||
BPUM_0903___p 588 AA--TGGAAAAAGC-ATAA 603
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