Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01597 and BPUM_0880
See
Amino acid alignment /
Visit
BSNT_01597 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_01597___yhxA.1.24716.seq
# -bsequence dna-align/BPUM_0880___bioA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01597___yhxA-BPUM_0880___bioA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01597___yhxA-BPUM_0880___bioA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01597___yhxA
# 2: BPUM_0880___bioA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1400
# Identity: 958/1400 (68.4%)
# Similarity: 958/1400 (68.4%)
# Gaps: 121/1400 ( 8.6%)
# Score: 3084.5
#
#
#=======================================
BSNT_01597___ 1 ATGGAAA-ACAT--TCAG---CAAAATCAGGGATTAAAGCAAAAAGATGA 44
|||.||| |||| .||| ||||||| ||.|.|| |||||||||
BPUM_0880___b 1 ATGAAAATACATGAGCAGGCTCAAAATC-----TTCAGGC-AAAAGATGA 44
BSNT_01597___ 45 GCAATTTGTGTGGCATGCCAT---GAAGGGAGCGCATCAAGC--GGACAG 89
.||.||..|.||||| |||| .|||||| |||.| |||||
BPUM_0880___b 45 TCAGTTGATCTGGCA--CCATATGAAAGGGA------CAAACAAGGACA- 85
BSNT_01597___ 90 CCTGATAG--------CCCAGAAGGCCGAGGGGGCCTGGGTAACCGACAT 131
.|||.|| ..||..||||.||.||.||.|||||.||.||.||
BPUM_0880___b 86 -ATGAAAGTATGGTCATTCACGAGGCAGAAGGCGCATGGGTGACAGATAT 134
BSNT_01597___ 132 AGACGGACGCCGCTATTTGGATGCGATGTCCGGTTTGTGGTGCGTCAACA 181
..|.||....||||.|||.||.|.||||||.|||.|.|||||.||.||..
BPUM_0880___b 135 TCATGGGAATCGCTGTTTAGACGGGATGTCAGGTCTTTGGTGTGTAAATG 184
BSNT_01597___ 182 TTGGTTACGGCAGAAAGGAGCTTGCGGAGGCTGCCTATGAGCAACTAAAG 231
|.||.||.|||||.||.||||||||.||.||.||.|||.|||||.|||||
BPUM_0880___b 185 TCGGATATGGCAGGAAAGAGCTTGCAGAAGCGGCGTATAAGCAATTAAAG 234
BSNT_01597___ 232 GAGCTGCCTTACTACCCGTTAACGCAAAGTCACGCACCCGCAATTCAACT 281
....||||||||||.|||.|.||.|||||.||||.|||.||.|||||.||
BPUM_0880___b 235 ACAATGCCTTACTATCCGCTCACACAAAGCCACGTACCGGCGATTCAGCT 284
BSNT_01597___ 282 GGCGGAAAAGCTGAATGAATGGCTTGGCGGCGATTATGTTATCTTTTTTT 331
|||.|||||.||.|||||.|||||||||||.||||||||.|||||.||||
BPUM_0880___b 285 GGCTGAAAAACTAAATGAGTGGCTTGGCGGTGATTATGTCATCTTCTTTT 334
BSNT_01597___ 332 CCAACAGCGGATCGGAAGCAAACGAAACTGCTTTTAAAATTGCCCGCCAG 381
|.||||||||.||.|||||.||.|||.|.||.||||||||.|||...||.
BPUM_0880___b 335 CTAACAGCGGTTCTGAAGCCAATGAAGCCGCATTTAAAATGGCCAAACAA 384
BSNT_01597___ 382 TACCATCTGCAAAACGG--------CGACCACAGCCGTTATAAATTCATC 423
||.|||..||||||.|| |.|..||| |||||||||
BPUM_0880___b 385 TATCATGCGCAAAAAGGAGAGAGTACAAGGACA--------AAATTCATC 426
BSNT_01597___ 424 TCAAGATATCGGGCATACCACGGCAATACATTGGGAGC-GCTCT--CAGC 470
||..|.||||||.|.||.|||||||||||| |.||| ||||| |.||
BPUM_0880___b 427 TCTCGGTATCGGTCGTATCACGGCAATACA---GCAGCAGCTCTTGCCGC 473
BSNT_01597___ 471 TACCGGACAGGCGCAGCGGAAATATAAATACGAGCCTTTGAGCCAAGGGT 520
.|||||.||.||||||||.|||||||||||.||.||.||..|.||.||.|
BPUM_0880___b 474 AACCGGTCAAGCGCAGCGTAAATATAAATATGAACCATTAGGTCAGGGTT 523
BSNT_01597___ 521 TCCTGCATGCAGCTCCGCCAGATATATACCGGAATCCTGATGATGCAGAC 570
|..|.||||..||.|||||.|||||.||.||..|.|||||.|||..|||.
BPUM_0880___b 524 TTATTCATGTCGCACCGCCTGATATGTATCGTCACCCTGAGGATCAAGAG 573
BSNT_01597___ 571 ACGCTTGAAAGCGCAAATGAAATCGACC--GCATCATGACATGGGAATTA 618
|..||.|.|||.|||...|.|||.||.| || ||||||.||||||.||
BPUM_0880___b 574 AATCTGGCAAGTGCAGCAGCAATAGATCAAGC--CATGACGTGGGAACTA 621
BSNT_01597___ 619 AGCGAAACGATTGCCGGGGTCATTATGGAGCCCATCATTACAGGCGGAGG 668
||.||.|||||.||.|||||||||||||||||.|||||||||||||||||
BPUM_0880___b 622 AGTGAGACGATAGCTGGGGTCATTATGGAGCCGATCATTACAGGCGGAGG 671
BSNT_01597___ 669 CATCCTAATGCCGCCGGACGGATATATGAAAAAGGTGGAGGACATTTG-- 716
.||||||||||||||..|.||.|||.||||.|||||..|.|||||.||
BPUM_0880___b 672 TATCCTAATGCCGCCAAAAGGGTATTTGAAGAAGGTCAAAGACATCTGTG 721
BSNT_01597___ 717 ---CCGGCGCCACGGAGCCCTTTTGATTTGCGATGAAGTGATCTGCGGGT 763
| |||.|||||.|||.|.|||...||||||||.||||||||.|
BPUM_0880___b 722 AATC-----CCATGGAGCGCTTCTCATTGTAGATGAAGTCATCTGCGGAT 766
BSNT_01597___ 764 TTGGACGGACAGGCGAGCCGTTCGGGTTTATGCACTACGGTGTGAAGCCT 813
||||.||||||||..|||.|||.||.||||||||..|.|..||.|||||.
BPUM_0880___b 767 TTGGCCGGACAGGGAAGCGGTTTGGTTTTATGCATGAGGAAGTAAAGCCG 816
BSNT_01597___ 814 GATATCATTACGATGGCAAAGGGAATCACAAGCGCGTATCTGCCATTGTC 863
|||||.||.||.||||||||.||.||||||||||..|||.|.||..|.||
BPUM_0880___b 817 GATATTATCACTATGGCAAAAGGGATCACAAGCGGCTATTTACCGCTTTC 866
BSNT_01597___ 864 AGCGAC-TGCTATTAAACGGGACATTTTCGAAGCGTAT-CAGGGGGAAGC 911
.||.|| || |.|.|||||.||.||.|..|||||.||| || ||.||||.
BPUM_0880___b 867 TGCAACGTG-TGTGAAACGAGAAATCTATGAAGCCTATGCA-GGAGAAGA 914
BSNT_01597___ 912 TCCTTATGACCGTTTCCGCCACGTGAACACGTTCGGCGGAAGCCCGGCTG 961
|.|.||||||.|..|.|||||.|||||.||.||.|||||....||.|||.
BPUM_0880___b 915 TACGTATGACAGACTGCGCCATGTGAATACATTTGGCGGTCATCCTGCTT 964
BSNT_01597___ 962 CCTGTGCCTTGGC-GTTGAAAAACCTGCAAATTATGGAGGACGAACTGCT 1010
|||||||..|||| .||| ..|||||..|.||.|||||..||||.|
BPUM_0880___b 965 CCTGTGCGGTGGCACTTG-CCAACCTAGAGATAATGGAAAACGAGC---- 1009
BSNT_01597___ 1011 GATTCAG-----CGATCCCGCGA-TCTTG---GAGCAAAGCTTTTAGGTG 1051
|.|.|| ||.| |||.|| .||.| |||..|.||||..|.||
BPUM_0880___b 1010 -AATTAGTGGAACGGT-CCGAGACGCTCGGCCGAGATATGCTTGAACGT- 1056
BSNT_01597___ 1052 AGCTCCAAGCTCTGAGAGAACACCCGGCAGTCGGGGATGTTAGAGGAAAA 1101
.|.||||...|.|.|||||||||....|||||.|||||.|||||||||
BPUM_0880___b 1057 --TTGCAAGAGTTAAAAGAACACCCATTTGTCGGAGATGTCAGAGGAAAA 1104
BSNT_01597___ 1102 GGGCTGCTGATCGGAATCGAACTCGTCAAAGATAAATTGACTAAAGAGCC 1151
||..|||||.|.||.||.||.||.||..|||||.||...||.||..|.||
BPUM_0880___b 1105 GGTTTGCTGTTTGGCATTGAGCTTGTTCAAGATCAACAAACCAAGAAACC 1154
BSNT_01597___ 1152 GGCTG------ATGCCGCCAAAGTAAACCAAGTGGTTGCGGCGTGCAAAG 1195
.|||| |||.| ||....|||.||.||||.|..||.|||.
BPUM_0880___b 1155 AGCTGAACCTCATGTC------GTTGGTCAATTGATTGCTGAATGTAAAA 1198
BSNT_01597___ 1196 AAAAAGGGCTGATCATCGGCAAAAACGGCGATACAGTCGCCGGCTACAAC 1245
||...||||||||.|||||.|||||.||.||||||||.|||||||..||.
BPUM_0880___b 1199 AACGGGGGCTGATTATCGGGAAAAATGGGGATACAGTGGCCGGCTTTAAT 1248
BSNT_01597___ 1246 AACGTCATCCAGCTTGCGCCGCCATTTTGCCTG------ACAGAAGAGGA 1289
|||||...|||||||||.||||| .||| |||||.||.||
BPUM_0880___b 1249 AACGTTGCCCAGCTTGCACCGCC------GCTGAATATAACAGATGATGA 1292
BSNT_01597___ 1290 CCTTTCCTTTATCGTGAAAACGGTGAAAGAAAGC-TTTCAAACGATATAA 1338
|...||.||||||.|.||.||..|.||||||||| |..||.| |.||||.
BPUM_0880___b 1293 CGCCTCATTTATCATCAATACATTAAAAGAAAGCATGGCACA-GCTATAG 1341
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.