Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01526 and BPUM_0857
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence dna-align/BSNT_01526___yhbH.1.24716.seq
# -bsequence dna-align/BPUM_0857___yhbH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01526___yhbH-BPUM_0857___yhbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01526___yhbH-BPUM_0857___yhbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01526___yhbH
# 2: BPUM_0857___yhbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1195
# Identity: 930/1195 (77.8%)
# Similarity: 930/1195 (77.8%)
# Gaps: 47/1195 ( 3.9%)
# Score: 3612.0
#
#
#=======================================
BSNT_01526___ 1 ATGTCCC-------AAAATGACAGCGGCCATTTTTTGATTTCTGAGGAAA 43
||||||| ||||.|.||| |||.||| |.|||.|||||.
BPUM_0857___y 1 ATGTCCCGGCAAGGAAAAAGTCAG------TTTATTG-TATCTCAGGAAG 43
BSNT_01526___ 44 ACTGGTCCCTCCATCGCAAAGGCTTCGATGACCAGCAGCGCCACCAGAAA 93
||||||||||||||||.|||||||..||.|||||||||||.||.||||||
BPUM_0857___y 44 ACTGGTCCCTCCATCGAAAAGGCTATGACGACCAGCAGCGTCATCAGAAA 93
BSNT_01526___ 94 AAAGTGCAGGAAGCGATCAAAAACAATCTTCCGGACCTCGTAACTGAGGA 143
|||||..|.||||||||.|||||||||.|.|||||.||.||.||.|||||
BPUM_0857___y 94 AAAGTCAAAGAAGCGATTAAAAACAATTTGCCGGATCTTGTCACAGAGGA 143
BSNT_01526___ 144 AAGCATTATTATGTCTAATGGAAAAGATGTAGTGAAGATCCCAATCCGTT 193
|||||||||.||||||||||||||||||||.||.|||||.||.||.||||
BPUM_0857___y 144 AAGCATTATCATGTCTAATGGAAAAGATGTTGTTAAGATTCCGATTCGTT 193
BSNT_01526___ 194 CACTTGATGAGTATAAAATCCGTTATAACTATGATAAAAATAAACATGTA 243
|..|.|||||.||||||||.|||||.|||||.|||||||||||.|||||.
BPUM_0857___y 194 CGTTAGATGAATATAAAATTCGTTACAACTACGATAAAAATAAGCATGTG 243
BSNT_01526___ 244 GGGCAAGGAGACGGCGAGAGCCAGGTTGGAGATGTTGTGGCCCGGGATGG 293
||.||.||.||.||.||.|||.||||.||.|||.||||.||.||.|||||
BPUM_0857___y 244 GGTCAGGGCGATGGAGATAGCGAGGTAGGCGATATTGTCGCACGTGATGG 293
BSNT_01526___ 294 ATCAGACAAAAAACAAGGGCCTGGAAAAGGGCAGGGTGCCGGTGATCAGG 343
||||||.|..||.|||||||..|||||.||.|||.||||.||.|||||||
BPUM_0857___y 294 ATCAGATAGTAAGCAAGGGCAAGGAAAGGGTCAGAGTGCAGGGGATCAGG 343
BSNT_01526___ 344 CAGGCGAGGATTATTATGAAGCGGAAGTTTCATTAATGGATTTAGAAGAA 393
|.||.|||||||||||.|||||.||.||.||||||||||||.|.||.|||
BPUM_0857___y 344 CTGGAGAGGATTATTACGAAGCAGAGGTCTCATTAATGGATCTTGAGGAA 393
BSNT_01526___ 394 GCGCTTTTTAAAGAATTAGAGCTTCCGAATCTCCAACAAAAAGAGCGGGA 443
|||||.|||...|||||||||||.||.||.||..||||||||||||..||
BPUM_0857___y 394 GCGCTGTTTCGGGAATTAGAGCTGCCAAACCTTAAACAAAAAGAGCTTGA 443
BSNT_01526___ 444 CAATATCATTCATACAG-ATATCGAGTTTAATGATATCCGTAAAACAGGG 492
|.|.|||||| .|..|| |.||.||||||||||||||.||.|||||.|||
BPUM_0857___y 444 CGACATCATT-GTTGAGCAAATTGAGTTTAATGATATTCGCAAAACCGGG 492
BSNT_01526___ 493 TTAACCGGTAATATTGATAAGAAAAGAACGATGATGTCAGCCTTTAAACG 542
|||||.||.||||||.||||.|||.||||||||.|.|||||.||||||||
BPUM_0857___y 493 TTAACAGGGAATATTCATAAAAAACGAACGATGCTCTCAGCATTTAAACG 542
BSNT_01526___ 543 AAACGCAATGTCAGGAAAACCGTCGTTCTACCCAATTTATCCGGAGGACC 592
|||.||||||.||||.|..||.||.||.||.|||||.|||||.|||||..
BPUM_0857___y 543 AAATGCAATGACAGGTAGCCCTTCCTTTTATCCAATCTATCCAGAGGATA 592
BSNT_01526___ 593 TGAAATATAAGACGTGGAATGACATCACAAAGCCCGAATCAAAAGCCGTC 642
|.||||||||||||||||||||..|.||.||.||.||.||.|||||||||
BPUM_0857___y 593 TCAAATATAAGACGTGGAATGAAGTGACCAAACCAGAGTCGAAAGCCGTC 642
BSNT_01526___ 643 GTTTTAGCCATGATGGATACAAGCGGCAGTATGGGGGTTTGGGAAAAATA 692
||||||||.|||||||||||.|||||.|||||||||.|||||||||||||
BPUM_0857___y 643 GTTTTAGCAATGATGGATACGAGCGGAAGTATGGGGCTTTGGGAAAAATA 692
BSNT_01526___ 693 CATGGCCAGAAGCTTCTTTTTCTGGATGACCCGTTTTTTGCGGACAAAAT 742
.|||||.|||||.||.||.||.||||||||.|||||.||.||||||||.|
BPUM_0857___y 693 TATGGCGAGAAGTTTTTTCTTTTGGATGACACGTTTCTTACGGACAAAGT 742
BSNT_01526___ 743 ACGAGACTGTGGAAATTGAATTTATTGCCCATCATACAGAAGC-AAGAGT 791
|.|||||.||.||.||||||||||||||||||||||||||.|| ||| ||
BPUM_0857___y 743 ATGAGACGGTCGATATTGAATTTATTGCCCATCATACAGAGGCGAAG-GT 791
BSNT_01526___ 792 GGTCTCGGAGGAGGATTTTTTCTCAAAGGGAGAAAGCGGCGGAACCATTT 841
.|||...||.||..||||.|||||....||.||.|||||.|||||.||||
BPUM_0857___y 792 TGTCGATGAAGAACATTTCTTCTCGCGCGGCGAGAGCGGGGGAACGATTT 841
BSNT_01526___ 842 GTTCTTCCGTATATCGGAAGTCGCTTGAGCTTATTGATGAAAAGTACAAT 891
|.||.||.||.|||||.||..|.||.|||||.||.||.|||...||
BPUM_0857___y 842 GCTCCTCTGTCTATCGAAAAGCACTAGAGCTCATAGACGAACGTTA---- 887
BSNT_01526___ 892 CCCGCC----CGCTATAACATTTATCCGTTTCATTTTTCTGACGGTGACA 937
.||||| ||.|||||.||||||||.||||||||||||||.||.||||
BPUM_0857___y 888 TCCGCCATCGCGATATAATATTTATCCTTTTCATTTTTCTGATGGAGACA 937
BSNT_01526___ 938 ACCTGACATCTGATAACGCGCGCTGTGTGAAGCTGGTCAATGATATTATG 987
|..|||||||.|||||.||.||.||.||||||||.||...|||.||||||
BPUM_0857___y 938 ATTTGACATCAGATAATGCACGTTGCGTGAAGCTTGTGTCTGAAATTATG 987
BSNT_01526___ 988 AAGAAGGCCAATCTATTCTGTTACGGCGAGGTCAATCAGTACAACAGGCA 1037
||.||.||.|||.||||||||||.||.||.||.|||||.|||||||||||
BPUM_0857___y 988 AAAAAAGCTAATTTATTCTGTTATGGTGAAGTGAATCAATACAACAGGCA 1037
BSNT_01526___ 1038 TTCAACGTTAATGTCTGCATATAAAAATGTAAAAGATGAGAAATTTAAGT 1087
|||.||.||||||||.||||||||..||.||.|.|||||||||||||||.
BPUM_0857___y 1038 TTCTACATTAATGTCAGCATATAAGCATATACAGGATGAGAAATTTAAGC 1087
BSNT_01526___ 1088 ACTATATTTTAAAACAGAAATCTGATGTTTTTCAGGCTCT--AAAGAACT 1135
|.||||||||.||.||.|||||.|||||.||||..|| || |||.||.|
BPUM_0857___y 1088 ATTATATTTTGAAGCAAAAATCAGATGTCTTTCTCGC-CTTAAAAAAATT 1136
BSNT_01526___ 1136 TTTTCAGAAATGAAG-AGTCTGGTGTAAGCCATCAATTTTCGTAA 1179
|||||||.|| |||| ||| || ||||||||
BPUM_0857___y 1137 TTTTCAGCAA-GAAGAAGT-------------TC---TTTCGTAA 1164
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