Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01524 and BPUM_0856
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_01524___prkA.1.24716.seq
# -bsequence dna-align/BPUM_0856___prkA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01524___prkA-BPUM_0856___prkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01524___prkA-BPUM_0856___prkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01524___prkA
# 2: BPUM_0856___prkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1901
# Identity: 1501/1901 (79.0%)
# Similarity: 1501/1901 (79.0%)
# Gaps: 10/1901 ( 0.5%)
# Score: 5892.5
#
#
#=======================================
BSNT_01524___ 1 ATGGATATATTAAAGAAAATTGAACAGTACAGAGAGGAAGAGCAGCGGCT 50
||||||||.|||||||||||.||||||.|||||||.|||||||||||.||
BPUM_0856___p 1 ATGGATATTTTAAAGAAAATCGAACAGCACAGAGAAGAAGAGCAGCGTCT 50
BSNT_01524___ 51 GAAATGGGAAGGAACTTTCGCCGATTATTTGGAGATTATTAAAGAAAATC 100
.||||||||||||||.||.|.|||.|||||.||.|||||.||.|||||||
BPUM_0856___p 51 TAAATGGGAAGGAACATTTGGCGAGTATTTAGACATTATAAAGGAAAATC 100
BSNT_01524___ 101 CGATGGTCGCGCAATCTGCTCATTCTCGAGTTTTTAATATGATAAAAGAC 150
|..|.|||||.|||||||||||||||||.||||.|.|||||||.||||||
BPUM_0856___p 101 CACTTGTCGCTCAATCTGCTCATTCTCGCGTTTATCATATGATTAAAGAC 150
BSNT_01524___ 151 AGCGGGAT---AGAGGA-AATTGACGGACGCAAGAA-GTACAGTTTTTTT 195
|||||||| |||||| |||.| ||.| |||| |||||..||||||
BPUM_0856___p 151 AGCGGGATTGAAGAGGAGAATGG--GGTC---AGAACGTACAAATTTTTT 195
BSNT_01524___ 196 GACCGCGAGCTGTTCGGGCTTGAAGAATCTCTGGAGCGTCTTGTGGAAGA 245
||.|..|||||.||.||..|.||.|||||..||||..|..|.||||||||
BPUM_0856___p 196 GATCAGGAGCTTTTTGGATTAGAGGAATCGTTGGAAAGATTAGTGGAAGA 245
BSNT_01524___ 246 GTATTTTCATCCGGCTGCCAAACGTCTAGATGTCAGAAAGCGGATTCTAT 295
.||||||||.||.|||||||||||.||.|||||.||.|||||.|||.|.|
BPUM_0856___p 246 ATATTTTCACCCTGCTGCCAAACGGCTTGATGTGAGGAAGCGTATTTTGT 295
BSNT_01524___ 296 TGCTGATGGGGCCTGTGAGCGGCGGTAAATCCACGCTGGTCACGATGCTC 345
||.|.|||||.||.||||||||.||.|||||.||.||.||.||.|.|||.
BPUM_0856___p 296 TGTTAATGGGACCAGTGAGCGGTGGGAAATCTACACTTGTTACTAGGCTG 345
BSNT_01524___ 346 AAAAAAGGTCTCGAAGCGTACACGCTGACAGATAATGGCGCTGTATATGC 395
||||.|||.||.||||..||..|.|||||||||||||||||.||.|||||
BPUM_0856___p 346 AAAAGAGGACTAGAAGAATATTCACTGACAGATAATGGCGCAGTCTATGC 395
BSNT_01524___ 396 GATTAAAGGCTGCCCGATGCACGAGGACCCTCTACATTTAATCCCCCATC 445
|||.|||||||||||||||||.||.||.||.||.|||.|.||.||.||..
BPUM_0856___p 396 GATCAAAGGCTGCCCGATGCATGAAGATCCGCTTCATCTTATTCCGCAAA 445
BSNT_01524___ 446 ATTTACGCGATGACTTTTACAGAGAATACGGCATTAGAATAGAAGGAAGT 495
||.|.||.||.||.||.||.|||||.||.||||||.|..||.|.||.|.|
BPUM_0856___p 446 ATCTGCGTGAGGATTTCTATAGAGAGTATGGCATTCGTGTACAGGGGAAT 495
BSNT_01524___ 496 CTTTCTCCTTTAAATGTCATGAGGCTGGAGGAAGAGTACGGAGGAAGAAT 545
.|.||.|||||.|||.|.|||||||||||.||.||.|.|||.||..||||
BPUM_0856___p 496 TTGTCCCCTTTGAATATGATGAGGCTGGAAGAGGAATTCGGCGGGCGAAT 545
BSNT_01524___ 546 TGAGGATGTGAAGGTGGAGCGCATCTTCTTTTCAGAAGATAAGCGTACGG 595
||||||.||.|.|||.||.||.|||||.||.|||||.|||||.||.||.|
BPUM_0856___p 546 TGAGGACGTAAGGGTTGAACGGATCTTTTTCTCAGAGGATAAACGGACCG 595
BSNT_01524___ 596 GAATTGGAACATTCAGTCCCTCTGATCCGAAATCTCAGGATATCGCCGAT 645
|.|||||.||.||.|||||.|||||||||||||||||.||.||.||.|||
BPUM_0856___p 596 GGATTGGTACCTTTAGTCCGTCTGATCCGAAATCTCAAGACATTGCTGAT 645
BSNT_01524___ 646 TTGACGGGGAGTATTGATTTCTCAACAATCGCCGAGTACGGTTCAGAATC 695
||.||.||.||.|||||.||.||.||.||.||.||.|..||.|||||.||
BPUM_0856___p 646 TTAACAGGAAGCATTGACTTTTCCACTATTGCTGAATTTGGATCAGAGTC 695
BSNT_01524___ 696 AGATCCGCGCGCTTACCGGTTTGACGGAGAGCTGAATAAAGCGAACCGCG 745
||||||..|.||.|||||.|||||.|||||.||.||||||||.|||||.|
BPUM_0856___p 696 AGATCCAAGGGCCTACCGCTTTGATGGAGAACTCAATAAAGCAAACCGGG 745
BSNT_01524___ 746 GGATGATGGAGTTTCAGGAGATGCTGAAATGTGATGAGAAATTTCTCTGG 795
|.|||||||||||||||||||||.|.||.|||||||||||||||||.|||
BPUM_0856___p 746 GAATGATGGAGTTTCAGGAGATGTTAAAGTGTGATGAGAAATTTCTATGG 795
BSNT_01524___ 796 CATTTGCTTTCCTTGACACAGGAAGGGAATTTTAAAGCTGGGCGGTTTGC 845
|||.|.||.||.||.||.||.|||||.|||||||||||.||.||.|||||
BPUM_0856___p 796 CATCTTCTGTCATTAACGCAAGAAGGAAATTTTAAAGCAGGCCGTTTTGC 845
BSNT_01524___ 846 GTTAATTTCTGCTGATGAGCTGATTGTGGCTCACACGAATGAAACGGAGT 895
.||.||...|||.|||||..||||.||.|||||.|||||||||||.||||
BPUM_0856___p 846 CTTGATAAGTGCAGATGAATTGATCGTTGCTCATACGAATGAAACCGAGT 895
BSNT_01524___ 896 ATCGCTCATTTATTTCTAATAAGAAGAATGAAGCCCTGCACTCGAGAATC 945
|.||.||.||||||||.|||||.|||||.||.||..||||.||.|||||.
BPUM_0856___p 896 ACCGGTCGTTTATTTCAAATAAAAAGAACGAGGCTTTGCATTCAAGAATT 945
BSNT_01524___ 946 ATCGTGATGCCGGTTCCTTATAATTTAAAAGTGTCAGAGGAAGAGAGAAT 995
||.|||||||||.|.||||||||.||.||.|||.|||||||.||..|.||
BPUM_0856___p 946 ATTGTGATGCCGATCCCTTATAACTTGAAGGTGACAGAGGAGGAACGCAT 995
BSNT_01524___ 996 TTATGAAAAAATGATCGCTGAGAGCGATGTGGCGGATGTTCATATTGCCC 1045
||||.|.||||||||..|.||.||.|||||.||.|||||.||||||||.|
BPUM_0856___p 996 TTATCATAAAATGATTTCAGAAAGTGATGTCGCAGATGTGCATATTGCAC 1045
BSNT_01524___ 1046 CGCATACGTTGAAGGTCGCCGCGATGTTCTCAATCCTTACCCGGTTAAAG 1095
||||.|||.|.||.||.||.|||||||||||.||.||.||..|..|.||.
BPUM_0856___p 1046 CGCACACGCTAAAAGTGGCAGCGATGTTCTCCATTCTGACAAGACTCAAA 1095
BSNT_01524___ 1096 GAACCGAAGCGGTCGGATATTGATCTGGTCAAGAAAATGAGACTGTATGA 1145
||.||||||||.||.|||||||||.||||.||.||||||.|.||||||||
BPUM_0856___p 1096 GAGCCGAAGCGTTCTGATATTGATTTGGTGAAAAAAATGCGTCTGTATGA 1145
BSNT_01524___ 1146 TGGAGAAAGTGTGGAAGGATATAATTCTGTCGACGTTGAGGATATGAAAA 1195
.|||||.|||||.|||||.|.|.|.||||..||..||||.||.|||||||
BPUM_0856___p 1146 CGGAGAGAGTGTCGAAGGCTTTCAATCTGCTGATATTGATGAGATGAAAA 1195
BSNT_01524___ 1196 AAGAATATAATGATGAAGGTATGAGCGGCATTGATCCGCGGTACGTGATC 1245
|.||||.|.||||||||||.||||||||.||||||||.|||||.||.||.
BPUM_0856___p 1196 AGGAATTTCATGATGAAGGGATGAGCGGAATTGATCCACGGTATGTCATT 1245
BSNT_01524___ 1246 AACCGGATATCTTCAACGATTATCAGAAAGAATATGGAATCGATTAATTC 1295
|||||.||.||.||.||.||||||||.|||||.|||||||||||||||.|
BPUM_0856___p 1246 AACCGCATTTCCTCCACTATTATCAGGAAGAACATGGAATCGATTAATGC 1295
BSNT_01524___ 1296 TCTCGATGTCCTTCGTTCCTTAAAAGAAGGTCTTGATCAGCACCCATCAA 1345
.||.||||||||||||||.|||||||||||.||.||||||||.||.||.|
BPUM_0856___p 1296 CCTAGATGTCCTTCGTTCGTTAAAAGAAGGACTCGATCAGCATCCGTCTA 1345
BSNT_01524___ 1346 TTTCAAGCGAGGACAGGGAGCGGTATTTGAATTTTATTTCTGCCGCCCGC 1395
|.||.||.||||||||||||||.|||||||||||||||||||..||.||.
BPUM_0856___p 1346 TCTCCAGTGAGGACAGGGAGCGCTATTTGAATTTTATTTCTGTTGCTCGA 1395
BSNT_01524___ 1396 AAGGAATATGACGACATTGCGAAAAAGGAAGTTCAAAAAGCGTTTGTGTA 1445
||.||.||.|||||.||||||||.||||||||.|||||.||.||||||||
BPUM_0856___p 1396 AAAGAGTACGACGATATTGCGAAGAAGGAAGTACAAAAGGCATTTGTGTA 1445
BSNT_01524___ 1446 TTCGTATGAAGAATCAGCAAAAACACTTATGGACAATTACCTCGATAACG 1495
|||.|||||.||.||.||.|||||.||.|||||.|||||..|.|||||.|
BPUM_0856___p 1446 TTCCTATGAGGAGTCTGCGAAAACGCTCATGGATAATTATTTAGATAATG 1495
BSNT_01524___ 1496 TAGAGGCTTATTGCAATAAAAACAAGCTTCGTGATCCTTTGACAGGAGAG 1545
|.|||||.||||||||.|||||||||||.||||||||.||.||.||.||.
BPUM_0856___p 1496 TCGAGGCATATTGCAACAAAAACAAGCTGCGTGATCCATTAACTGGTGAA 1545
BSNT_01524___ 1546 GAAATGAACCCTGACGAAAAGCTGATGAGATCCATCGAAGAGCAGATCGG 1595
||||||||.|||||.||||||||.|||.|.||.||.||.|||||||||||
BPUM_0856___p 1546 GAAATGAATCCTGATGAAAAGCTTATGCGTTCAATTGAGGAGCAGATCGG 1595
BSNT_01524___ 1596 CATTTCGGAAAACGCCAAAAAAGCGTTCCGCGAAGAAATTTTAATCCGCA 1645
.|||||.|||||||||||||||||.||..|.|||||||||.|.||.||.|
BPUM_0856___p 1596 GATTTCTGAAAACGCCAAAAAAGCTTTTAGAGAAGAAATTCTGATTCGTA 1645
BSNT_01524___ 1646 TCTCAGCCTATGCGAGAAAAGGCAAGCGGTTTGATTACAATTCCCATGAA 1695
|.||.||.|||||.|||||.|||||.||.||||||||.|||||.||||||
BPUM_0856___p 1646 TTTCGGCTTATGCAAGAAAGGGCAAACGCTTTGATTATAATTCTCATGAA 1695
BSNT_01524___ 1696 AGACTGCGTGAAGCTATTCAGAAAAAGCTGTTTGCTGATCTGAAGGATGT 1745
|||.|||||||.||.||||||||.|||||||||||||||.|.||.|||||
BPUM_0856___p 1696 AGATTGCGTGAGGCGATTCAGAAGAAGCTGTTTGCTGATTTAAAAGATGT 1745
BSNT_01524___ 1746 CGTTAAAATTACGACCTCTACAAAAACGCCGGATGAACAGCAGCTGAAAA 1795
.||.|||||||||||.||.||.||||||||||||||||||||.|||||.|
BPUM_0856___p 1746 GGTGAAAATTACGACGTCAACGAAAACGCCGGATGAACAGCAACTGAAGA 1795
BSNT_01524___ 1796 AGGTAAATGAAGTCGTGGCCCGTTTAATTGATGAGCACGGCTACAACTCG 1845
|.||.||||||||.||.||..|.|||||||||||.||.|||||.||.||.
BPUM_0856___p 1796 AAGTGAATGAAGTAGTAGCTAGATTAATTGATGAACATGGCTATAATTCT 1845
BSNT_01524___ 1846 ACGAGCGCCAATGAGCTGCTGAAATATGTCGGCAGCCTGCTGAACCGATA 1895
||.||.||.|||||.||..|.|||||.||.||.||.||.||.||.||.||
BPUM_0856___p 1846 ACAAGTGCAAATGAACTTTTAAAATACGTAGGTAGTCTTCTCAATCGTTA 1895
BSNT_01524___ 1896 A 1896
|
BPUM_0856___p 1896 A 1896
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