Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01514 and BPUM_0845
See
Amino acid alignment /
Visit
BSNT_01514 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_01514.1.24716.seq
# -bsequence dna-align/BPUM_0845___yhbA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01514-BPUM_0845___yhbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01514-BPUM_0845___yhbA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01514
# 2: BPUM_0845___yhbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1206
# Identity: 861/1206 (71.4%)
# Similarity: 861/1206 (71.4%)
# Gaps: 99/1206 ( 8.2%)
# Score: 3081.5
#
#
#=======================================
BSNT_01514 1 -------AT------GAACGTTTATCAGCTCAAAGAAGAATTAATTGAAT 37
|| ||| ||| |||||||||||.|||.|||
BPUM_0845___y 1 GTGATTCATGTTGGAGAA---TTA-------AAAGAAGAATTGATTCAAT 40
BSNT_01514 38 ACGCGAAAAGCATTGGCGTGGACAAGATTGGTTTTACGACCGCTGATACT 87
|.||||||...|||||.||.||.||.||..|.|||.|.|..||||||||.
BPUM_0845___y 41 ATGCGAAAGAAATTGGTGTTGATAAAATCCGATTTGCAAGTGCTGATACA 90
BSNT_01514 88 TTTGA--CAGTTTAAAAGACCGTTTGATTCTT-CAAGAATCACTCGGCTA 134
||||| || |||||||||||..|.| |||| ||.|||||..|.||.||
BPUM_0845___y 91 TTTGATTCA--TTAAAAGACCGCCTCA-TCTTACATGAATCGTTAGGGTA 137
BSNT_01514 135 TCTCTCCGGCTTTGAAGAGCCGGATATCGAAAAAAGGGTGACGCCGAA-- 182
|.|.||.||||||||||||||.|||||||||||| ||||
BPUM_0845___y 138 TTTGTCAGGCTTTGAAGAGCCTGATATCGAAAAA----------CGAACA 177
BSNT_01514 183 ---GCTTCTTT-----TGCCGAAAGCGAAATCAATAGTGGCAATTGCTCT 224
.||||||| |.|||||.||.||||||||.||.||.||.||.||
BPUM_0845___y 178 AACCCTTCTTTGCTGCTTCCGAAGGCCAAATCAATTGTTGCGATAGCGCT 227
BSNT_01514 225 CGCATATCCTTCCAGAATGAAGGATGCGCCGAGAAGCACGAGAACTGA-G 273
||||||||||||.|.||||||.|||||.||..||||.|| ||..|| |
BPUM_0845___y 228 CGCATATCCTTCTAAAATGAAAGATGCTCCCCGAAGTAC---AAAGGATG 274
BSNT_01514 274 C--GCAGGGGCATTTTTTGCAGAGCCTCCTGGGGAAAAGACTATCATGAT 321
| |.||.||.||.||.|||.|.|||||.|||||||.|||||||||||.|
BPUM_0845___y 275 CAAGAAGAGGGATCTTCTGCCGTGCCTCTTGGGGAACAGACTATCATGTT 324
BSNT_01514 322 GTGCTGAGGGAAAAGCTTGATCTGCTGGAGGATTTTCTAAAAAGCAAGCA 371
|||||||...|||||||.||..||||.||.||.||..|....|||||.||
BPUM_0845___y 325 GTGCTGAAAAAAAAGCTAGACATGCTTGAAGAATTCTTGCGTAGCAAACA 374
BSNT_01514 372 TGAGGATATCAGAACGAAGTCAATGGTTGATACAGGTGAATTGTCTGATC 421
||..||.|||.||||.||.||||||||.||.|||||||||.|||||||||
BPUM_0845___y 375 TGTCGACATCCGAACAAAATCAATGGTGGACACAGGTGAACTGTCTGATC 424
BSNT_01514 422 GCGCCGTTGCGGAACGTGCCGGAATTGGATTCAGTGCGAAAAACTGTATG 471
|.||.||.||||||||.||.||.||.||.||.||||||||.|||||||||
BPUM_0845___y 425 GTGCAGTAGCGGAACGCGCTGGCATCGGTTTTAGTGCGAAGAACTGTATG 474
BSNT_01514 472 ATCACAACACCCGAGTATGGCTCTTATGTGTATTTGGCGGAAATGATCAC 521
||.|..||.||.||||.|||.|||||||||||||||||.|||||||||||
BPUM_0845___y 475 ATTATCACGCCAGAGTTTGGGTCTTATGTGTATTTGGCCGAAATGATCAC 524
BSNT_01514 522 AAATATCCCTTTTGAGCCTGATGTGCCGATTGAAGATATGTGCGGGTCCT 571
||||.||||.|||||.||.||||.|...||||||||...|||||||.|.|
BPUM_0845___y 525 AAATGTCCCCTTTGAACCGGATGAGAAAATTGAAGACCAGTGCGGGACGT 574
BSNT_01514 572 GCACGAAATGCTTGGACGCCTGTCCGACGGGAGCACTGGTTAATCCCGGG 621
|.|..|||||..|.||..|.|||||.||.||.|||||.||.|||||.|||
BPUM_0845___y 575 GTAATAAATGTGTCGATTCGTGTCCAACTGGTGCACTTGTGAATCCAGGG 624
BSNT_01514 622 CAGCTTAATGCGCAGCGCTGCATCTCTTTTCTGACCCAGACAAAAGGATT 671
||.||.|||.|.||.||.||.||.||.|||.|.||.||.||||||||.||
BPUM_0845___y 625 CAACTGAATTCACAACGATGTATTTCCTTTTTAACGCAAACAAAAGGGTT 674
BSNT_01514 672 TTTACCTGATGAATTCCGGACAAAAATCGGAAACCGCCTGTACGGGTGCG 721
|||.|||||.|||||.||..|.|||||.|||||.||..||||.|||||.|
BPUM_0845___y 675 TTTGCCTGACGAATTTCGTTCGAAAATAGGAAATCGATTGTATGGGTGTG 724
BSNT_01514 722 ATACGTGCCAAACGGTATGCCCTCTCAATAAAGGGAAGGATTTTCATCTT 771
||||||||||||..||.|||||..||||||||||.|||||.|||||.||.
BPUM_0845___y 725 ATACGTGCCAAATTGTCTGCCCGATCAATAAAGGAAAGGACTTTCACCTG 774
BSNT_01514 772 CATCCGGAAATGGAGCCTGATCCTGAGATTGCCAAACCGTTATTGAAGCC 821
|||||.|||||||||||.||.||.||.|||||.||.|||.|.||.|||||
BPUM_0845___y 775 CATCCTGAAATGGAGCCGGACCCAGAAATTGCGAAGCCGCTCTTAAAGCC 824
BSNT_01514 822 GCTTTTGACCATCAGCAATCGGGAATTTAAGGAGAAATTCGGGCATGTCT 871
||||.|.||.|||||.|||||.||.|||||.||.||||.|||.|||||.|
BPUM_0845___y 825 GCTTCTTACGATCAGTAATCGTGAGTTTAAAGAAAAATACGGTCATGTTT 874
BSNT_01514 872 CAGGTTCTTGGCGCGGAAAAAAACCGATTCAGCGAAACGCCATTCTCGCG 921
|||||||.|||||.||.|||||.|||||||||||||||||.|||.|.||.
BPUM_0845___y 875 CAGGTTCATGGCGGGGGAAAAAGCCGATTCAGCGAAACGCAATTTTGGCA 924
BSNT_01514 922 CTTGCGCATTTTAAGGATGCTTCCGCACTGCC----TGAATTGACGGAAC 967
||.||.||||||||.|||.|.||.||..|.|| |.|||| ||..
BPUM_0845___y 925 CTCGCTCATTTTAAAGATACCTCTGCCTTACCAGTGTTAATT----GAGT 970
BSNT_01514 968 TGATGCACAAGGATCCGCGTCCTGTCATCAGGGGGACAGCCGCATGGGCA 1017
|||||||||||||.||..|.||.|||||..||||.||.||.||.||||||
BPUM_0845___y 971 TGATGCACAAGGACCCAAGACCGGTCATTCGGGGAACGGCTGCTTGGGCA 1020
BSNT_01514 1018 ATCGGAAAAATCGGAGAC-----CCCGCATACGCGGAAGAGCTTGAAAAA 1062
||.||.|||||.||.||| .|.||.|.| ||||||.||||||
BPUM_0845___y 1021 ATTGGCAAAATTGGCGACGATCAGCAGCTTCC-----AGAGCTGGAAAAA 1065
BSNT_01514 1063 GCGCTGGAA----AAAGAGAAGGATGAAGAGGCAAAGCTGGAAATTGAAA 1108
||.||.||| |||| .||||||||.|||||...|||.||||..|
BPUM_0845___y 1066 GCCCTTGAACGGGAAAG----TGATGAAGAAGCAAAAGAGGAGATTGTGA 1111
BSNT_01514 1109 AAGGAATTGA---TTTGCTAAAAGCTTCAGGCATGACTAAACGAGGCTTG 1155
||||.||||| |||.|..|.|.|||.| |..||||||..|
BPUM_0845___y 1112 AAGGGATTGAGCTTTTACAGACACCTTTA---AATACTAAATAA------ 1152
BSNT_01514 1156 TCCTGA 1161
BPUM_0845___y 1152 ------ 1152
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.