Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01448 and BPUM_0828
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_01448___ygzB.1.24716.seq
# -bsequence dna-align/BPUM_0828___ygzB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01448___ygzB-BPUM_0828___ygzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01448___ygzB-BPUM_0828___ygzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01448___ygzB
# 2: BPUM_0828___ygzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 276/354 (78.0%)
# Similarity: 276/354 (78.0%)
# Gaps: 6/354 ( 1.7%)
# Score: 1070.0
#
#
#=======================================
BSNT_01448___ 1 ATGGCGAAATACTCCAGCAAAATTAATAAAATCAGAACATTTGCGTTAAG 50
|||||||||||||||||.||.|||||||||||||||||||||||..|.||
BPUM_0828___y 1 ATGGCGAAATACTCCAGTAAGATTAATAAAATCAGAACATTTGCACTTAG 50
BSNT_01448___ 51 TTTGGTTTTCGTTGGGTTTATCATTATGTACATCGGGATCTTTTTCAAAG 100
|||||||||.|||||.|||.|.||.|||||.|||||..|.||.|||||||
BPUM_0828___y 51 TTTGGTTTTTGTTGGCTTTCTGATCATGTATATCGGTGTGTTCTTCAAAG 100
BSNT_01448___ 101 AGTCAGTTTTGCTTTCTAGTTTGTTTATGATACTTGGGCTTTTATCCATC 150
|.||..|||.|||.||.|.|||.||||||.||||.||..|.|||||.|||
BPUM_0828___y 101 AATCGATTTGGCTGTCGACTTTCTTTATGCTACTCGGCGTCTTATCGATC 150
BSNT_01448___ 151 GGTCTCAGCACGGTAGTTTACTTTTGGATCGGAATGCTTTCGACTAAAGC 200
||..|.||.||.||.|||||||||||||||||.||||||||.||.||.||
BPUM_0828___y 151 GGATTGAGTACAGTGGTTTACTTTTGGATCGGTATGCTTTCTACGAAGGC 200
BSNT_01448___ 201 GGTTCGCGTCATTTGTCCAGGCTGTGATAAAGAGACAAAGGTTTTAGGAA 250
.||.||.|||.|.||||||||||||||.||.||.|||||.||..|.||..
BPUM_0828___y 201 AGTCCGTGTCGTATGTCCAGGCTGTGAGAAGGAAACAAAAGTGCTTGGGC 250
BSNT_01448___ 251 GAGTCGATATGTGCATGCATTGCCGAGAGCCGCTGACTTTAGATAAGGGA 300
|.||.||.|||||||||||||||.||||||||||.||..|.|||...|||
BPUM_0828___y 251 GGGTGGACATGTGCATGCATTGCAGAGAGCCGCTTACACTCGATCCAGGA 300
BSNT_01448___ 301 TTAGAAGGAAAAGAATTTGATGAGTCTTATAATAAAAAGAAAATGTCGAA 350
||||||||.|||||.||||||||.||.||.|||..| ||||.|||
BPUM_0828___y 301 TTAGAAGGCAAAGAGTTTGATGAATCCTACAATCGA---AAAAAGTC--- 344
BSNT_01448___ 351 ATAA 354
||||
BPUM_0828___y 345 ATAA 348
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