Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01445 and BPUM_0826
See
Amino acid alignment /
Visit
BSNT_01445 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_01445___ygaF.1.24716.seq
# -bsequence dna-align/BPUM_0826___ygaF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01445___ygaF-BPUM_0826___ygaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01445___ygaF-BPUM_0826___ygaF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01445___ygaF
# 2: BPUM_0826___ygaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity: 349/484 (72.1%)
# Similarity: 349/484 (72.1%)
# Gaps: 26/484 ( 5.4%)
# Score: 1267.5
#
#
#=======================================
BSNT_01445___ 1 ATGACTATAGAAATCGGACAAAAAGCGCCTGATCTTGAGTTGAAAGGCGA 50
|||||.||.|||.|.||.||..|||..|||||..||||.||.|..||.||
BPUM_0826___y 1 ATGACAATCGAAGTAGGCCAGCAAGTACCTGAGATTGAATTAACTGGTGA 50
BSNT_01445___ 51 TCATGGGGAAACAGTAAAATTATCGGATTATAAAGGAAAGTACATCGTGC 100
..|.|||||.|.||||||..|.||.||.|.|||||||||..|.||.||.|
BPUM_0826___y 51 CAACGGGGAGAAAGTAAAGCTTTCCGACTTTAAAGGAAAACATATTGTCC 100
BSNT_01445___ 101 TTTATTTTTATCCAAAGGACATGACACCGGGATGTACAACTGAAGCATGC 150
|||||||.||||||||.||.||||||||.||.||||||||.||||||||.
BPUM_0826___y 101 TTTATTTCTATCCAAAAGATATGACACCCGGCTGTACAACAGAAGCATGT 150
BSNT_01445___ 151 GATTTTCGGGACAGTCACGAAAGCTTCGCTGAACTGGATGCCGTCATTAT 200
|||||.||.||..|.||..|||||||.||.|||.|.|||||.||||||||
BPUM_0826___y 151 GATTTCCGTGATCGCCATCAAAGCTTTGCAGAATTAGATGCTGTCATTAT 200
BSNT_01445___ 201 TGGCGTCAGCCCGGACAGCCAGGAAAAACACGGAAAATTTAAAGAGAAGC 250
.|||||.|||||.|||||.|||||.||.||...|||.||||||||.||.|
BPUM_0826___y 201 CGGCGTAAGCCCAGACAGTCAGGACAAGCATCAAAAGTTTAAAGAAAAAC 250
BSNT_01445___ 251 ATAACCTTCCATTTCTGCTTCTTGTAGATGACGAGCATAAGCTGGCGGAA 300
||.|..|.||.||..|.||||||||||||||.||.||.||..||.|.|||
BPUM_0826___y 251 ATGATTTACCGTTCTTACTTCTTGTAGATGATGAACAGAAATTGTCTGAA 300
BSNT_01445___ 301 GCATTTGATGTGTGGAAGCTGAAGAAAAACTTTGGAAAAGAGTATATGGG 350
||.||||..||||||||||||||.||.||||||||.|||||.||.|||||
BPUM_0826___y 301 GCCTTTGGAGTGTGGAAGCTGAAAAAGAACTTTGGCAAAGAATACATGGG 350
BSNT_01445___ 351 AATCGAGCGTTCCACTTTTTTAATTGATAAAGAAGGCCGGCTCATTAAAG 400
.|||||.|||||.||.|||.|.|||.||||||||||...|||..|.||||
BPUM_0826___y 351 CATCGAACGTTCAACGTTTCTTATTAATAAAGAAGGAACGCTTGTGAAAG 400
BSNT_01445___ 401 AATGGAGAAAAGTAAAAGTAAAGGACCATGTAGCCGAAGCGCTTCA--AA 448
|.|||||||||||.||.||.||.|||||.||||..|||||||||.| ||
BPUM_0826___y 401 AGTGGAGAAAAGTTAAGGTGAAAGACCACGTAGAAGAAGCGCTTGAGGAA 450
BSNT_01445___ 449 CCCTCAAAGATATGTCGGAAAAG--------TAA 474
| .||||| |||
BPUM_0826___y 451 C----------------TAAAAGCTCACGCTTAA 468
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.