Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01436 and BPUM_0812

See Amino acid alignment / Visit BSNT_01436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_01436___fabL.1.24716.seq
#    -bsequence dna-align/BPUM_0812___fabL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01436___fabL-BPUM_0812___fabL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01436___fabL-BPUM_0812___fabL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01436___fabL
# 2: BPUM_0812___fabL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 760
# Identity:     581/760 (76.4%)
# Similarity:   581/760 (76.4%)
# Gaps:          14/760 ( 1.8%)
# Score: 2200.0
# 
#
#=======================================

BSNT_01436___      1 ATGGAACAAAATAAATGTGCACTCGTAACAGGAAGCAGCCGCGGTGTCGG     50
                     |||...|||..||||||||||.|..|.|||||.||||||.|.|||||.||
BPUM_0812___f      1 ATGAGTCAACGTAAATGTGCATTAATTACAGGTAGCAGCAGAGGTGTAGG     50

BSNT_01436___     51 AAAAGCGGCCGCGATCAGACTTGCTGAGAACGGCTATAACATCGTCATTA    100
                     |||||..|..||..|..|.||.|||||.||.||.|||.||||.|||||||
BPUM_0812___f     51 AAAAGAAGTAGCCCTTCGCCTAGCTGAAAAAGGATATGACATTGTCATTA    100

BSNT_01436___    101 ACTATGCACGCAGCAAAAAAGCAGCATTAGAAACAGCGGAAGAAATTGAA    150
                     |||||||..|.|||||||||||.|||.|.|||||||||||||||||||||
BPUM_0812___f    101 ACTATGCGAGAAGCAAAAAAGCCGCACTTGAAACAGCGGAAGAAATTGAA    150

BSNT_01436___    151 AAGCTTGGCGTTAA---AGTGCTTGTCGTAAAAGCAAACGTAGGACAGCC    197
                     ..|.|.||.||.||   |.||.|||||   |||||.||||||||.|||||
BPUM_0812___f    151 GCGATGGGTGTCAAAACATTGGTTGTC---AAAGCCAACGTAGGTCAGCC    197

BSNT_01436___    198 TGCAAAAATCAAAGAAATGTTTCAGCAAATTGATGAAACGTTCGGCAGAC    247
                     .|..|||||||||||.||||||||||||||.||.|||||.||.|||.|..
BPUM_0812___f    198 AGAGAAAATCAAAGATATGTTTCAGCAAATCGACGAAACCTTTGGCCGTT    247

BSNT_01436___    248 TTGATGTTTTTGTCAATAATGCCGCTTCAGGAGTACTAAGACCTGTCATG    297
                     |.|||.|.|||||.||.|||||.||.|||||.||.|...|.|||.|||||
BPUM_0812___f    248 TAGATATATTTGTGAACAATGCGGCATCAGGTGTTCAGCGTCCTATCATG    297

BSNT_01436___    298 GAATTAGAAGAAACACACTGGGACTGGACGATGAACATTAATGCGAAAGC    347
                     ||..|.|||||.|..||.|||||||||||||||||.||.|||||||||||
BPUM_0812___f    298 GACCTTGAAGAGAATCATTGGGACTGGACGATGAATATCAATGCGAAAGC    347

BSNT_01436___    348 ATTGCTTTTCTGCGCTCAGGAAGCTGCCAAGCTAATGGAGAAGAACGGAG    397
                     .||..|.|||||||..||.|||||.||.||||||||||||||.|||||.|
BPUM_0812___f    348 TTTATTATTCTGCGGACAAGAAGCGGCAAAGCTAATGGAGAAAAACGGTG    397

BSNT_01436___    398 GCGGGCATATTGTCAGCATCAGTTCATTAGGCTCTATCCGCTATCTTGAA    447
                     ||||.|||||.|||||.||.||.|||.||||||||||.||||||||||||
BPUM_0812___f    398 GCGGTCATATCGTCAGTATTAGCTCACTAGGCTCTATTCGCTATCTTGAA    447

BSNT_01436___    448 AACTACACCACGGTCGGTGTATCAAAAGCAGCGTTAGAGGCTTTAACCCG    497
                     ||.|||||....||.||.||.|||||||||||.|||||.||.||.||.||
BPUM_0812___f    448 AATTACACAGTAGTTGGCGTCTCAAAAGCAGCATTAGAAGCATTGACGCG    497

BSNT_01436___    498 TTATCTTGCCGTTGAGCTTTCACCAAAACAAATTATCGTCAATGCTGTTT    547
                     ||||||..|.||||||||.||||.||||.|.||..|||||||.|||||.|
BPUM_0812___f    498 TTATCTATCTGTTGAGCTGTCACAAAAAAATATCGTCGTCAACGCTGTAT    547

BSNT_01436___    548 CAGGCGGAGCGATCGACACAGATGCGCTGAAACACTTCCCGAATAGAGAA    597
                     |||||||.||||||||.||.|||||.||.||.|||||||||||..|||||
BPUM_0812___f    548 CAGGCGGCGCGATCGATACCGATGCACTCAAGCACTTCCCGAACCGAGAA    597

BSNT_01436___    598 GATCTGCTTGAGGATGCGCGCC----AAAACACGCCGGCGGGACGCATGG    643
                     ||.||..|.||.|||    |||    ||||.||.||.||.||.||.||||
BPUM_0812___f    598 GAGCTTTTAGAAGAT----GCCAAGAAAAATACACCAGCTGGCCGAATGG    643

BSNT_01436___    644 TCGAAATTAAAGACATGGTTGATACTGTTGAGTTTCTAGTGTCTTCCAAG    693
                     |.|||||||||||.|||||.||.|..||.||.||.||.||.||...||||
BPUM_0812___f    644 TGGAAATTAAAGATATGGTCGACAGCGTGGAATTCCTTGTATCAGGCAAG    693

BSNT_01436___    694 GCTGACATGATCCGCGGACAGACAATTATCGTTGACGGCGGACGCTCACT    743
                     ||.||||||||..|.|||||.||.||||||||.||.||||||||.||..|
BPUM_0812___f    694 GCAGACATGATTAGAGGACAAACGATTATCGTGGATGGCGGACGTTCTTT    743

BSNT_01436___    744 GCTCGTTTAA    753
                     |||.||||||
BPUM_0812___f    744 GCTTGTTTAA    753


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