Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01434 and BPUM_0810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_01434___yfhQ.1.24716.seq
# -bsequence dna-align/BPUM_0810___mutY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01434___yfhQ-BPUM_0810___mutY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01434___yfhQ-BPUM_0810___mutY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01434___yfhQ
# 2: BPUM_0810___mutY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1161
# Identity: 799/1161 (68.8%)
# Similarity: 799/1161 (68.8%)
# Gaps: 111/1161 ( 9.6%)
# Score: 2508.0
#
#
#=======================================
BSNT_01434___ 1 ATGAACGTAC-TTGAAGACAAATTAAAACAAAAAGACATACAGCAATTTC 49
|||||.| || ||.||||.||..|..|.|..|||||.||...|..|||||
BPUM_0810___m 1 ATGAAAG-ACATTCAAGAAAAGCTGGACCGCAAAGATATTGCGGGATTTC 49
BSNT_01434___ 50 -GCGATGATTTAATCTCATGGTTTGAACGAGAGCAGCG--CGTTTTGCCG 96
|| |||||||||||...||||..|||..|||.||.|| |..|| |||
BPUM_0810___m 50 AGC-ATGATTTAATCGATTGGTACGAAAAAGAACAACGAACACTT--CCG 96
BSNT_01434___ 97 TGGAGAGAGGACCAAGATCCATATAAGGTGTGGGTATCTGAAGTGATGCT 146
|||.|.||..|.|||||||||||.|..||.||||||||.|||||||||||
BPUM_0810___m 97 TGGCGTGAAAATCAAGATCCATACAGAGTCTGGGTATCAGAAGTGATGCT 146
BSNT_01434___ 147 GCAGCAAACGAGAGTAGAGACAGTGATTCCTTACTTTCTCCGGTTTGTGG 196
.||||||||||||||.||.||.||.|||||.|||||...|||||||.|||
BPUM_0810___m 147 TCAGCAAACGAGAGTGGATACGGTCATTCCGTACTTCAACCGGTTTATGG 196
BSNT_01434___ 197 AACAATTCCCGACAGTGGAAGCGCTCGCTGATGCTGATGAAGAAAAGGTG 246
|.|||||||||||||||.|||..||.|||...||||||||||||||.||.
BPUM_0810___m 197 AGCAATTCCCGACAGTGAAAGATCTTGCTTTAGCTGATGAAGAAAAAGTC 246
BSNT_01434___ 247 CTGAAAGCATGGGAAGGGCTCGGCTATTATTCGCGAGTCAGAAACCTGCA 296
.||||||||||||||||.||.||.||.||.||..||||..|.||..|.|
BPUM_0810___m 247 ATGAAAGCATGGGAAGGTCTTGGTTACTACTCAAGAGTGCGTAATTTAC- 295
BSNT_01434___ 297 AAGC-GCGGTAAAAGAAGTGAAACAGGAA---TACGGCGGCATTGTTCCT 342
|.|| ||.||.|||||||| |.|.||| ||||..|||.||||.|||
BPUM_0810___m 296 AGGCAGCTGTGAAAGAAGT---ATATGAATCCTACGAGGGCGTTGTCCCT 342
BSNT_01434___ 343 CCAGACGAGAAAG--ATTTT---GGCGGGTTAAAAGGCGTCGGCCCTTAT 387
.|.||||.|.|| ||||| .|| |.|||||.||.|||||.|||
BPUM_0810___m 343 -GATACGAAAGAGCAATTTTCAAAGC----TCAAAGGTGTAGGCCCCTAT 387
BSNT_01434___ 388 ACAAAGGGAGCGGTGCTCAGCATTGCCTACAATAAACCCATTCCC-GCGG 436
||.|..||.||.|||||.||.||.|||||.|| .||.||||.||| ||||
BPUM_0810___m 388 ACGAGCGGCGCAGTGCTGAGTATCGCCTATAA-CAAGCCATACCCTGCGG 436
BSNT_01434___ 437 TTGACGGAAATGTGATGCGTGTCATGTCCAGGATTCTATCTATTTGGGAT 486
|.|||||.||.||.|||.|.|||||.|||.|.|||.|.||.||.||||||
BPUM_0810___m 437 TAGACGGCAACGTTATGAGGGTCATTTCCCGTATTTTGTCCATATGGGAT 486
BSNT_01434___ 487 GATATTGCCAAACCAAAAACAAGAACGATCTTTGAAGACGCCATACGAGC 536
||||||||.|||||||||||.||||..||.|| ||||.
BPUM_0810___m 487 GATATTGCAAAACCAAAAACGAGAAATATTTT-------------CGAGT 523
BSNT_01434___ 537 TT-------------TTATTTCCAAAGAAAAACCATCTGAATTTAATC-A 572
|| |.||||||...|||||.|||||.|||||.|||| |
BPUM_0810___m 524 TTGCGGTCGATCAGCTCATTTCCCGGGAAAAGCCATCAGAATTCAATCAA 573
BSNT_01434___ 573 GGGCTTGATGGAGCTTGGAGCCTTGATCTGTACGCCAAAATCACCCT-CA 621
|||| |||||||||||||.||..|.||.||.||.||||.||| |||| ||
BPUM_0810___m 574 GGGC-TGATGGAGCTTGGTGCGCTCATTTGCACCCCAACATC-CCCTGCA 621
BSNT_01434___ 622 TGCCTGCTTTGCCCGGTTCAGCA-GCATTGCTCAGCATTTGAAGAAGGCA 670
|||||..||||.||.| |.|.|| |||||||||.|||.|.|||||||||.
BPUM_0810___m 622 TGCCTCATTTGTCCTG-TGAACATGCATTGCTCGGCACTCGAAGAAGGCG 670
BSNT_01434___ 671 CTGAACGGGAGCTTCCGGTAAAAAGCAAAAAGAAAAAGCCCGGGA--TCA 718
.|.|.|..|||||.||.||.|||||.|||||||||||.|| || .||
BPUM_0810___m 671 TTCAGCATGAGCTCCCAGTGAAAAGTAAAAAGAAAAAACC---GACTGCA 717
BSNT_01434___ 719 AAA-CCATGGCCGCGATCG----TACTGACTGATGAAGACGGACAA-GTG 762
||| |.|||||.|| |.|| ||.| ||||||.| |.|.||| .|.
BPUM_0810___m 718 AAATCAATGGCAGC-AGCGGTGTTATT---TGATGACG-CAGGCAACCTC 762
BSNT_01434___ 763 TATATCCACAAACGGCCGTCTAAAGGTTTGCTCGCCAACCTGTGGGAATT 812
|||||.||.||.|||||...||.|||..|.||.||.||..|.||||||||
BPUM_0810___m 763 TATATTCATAAGCGGCCAAGTACAGGCCTTCTTGCGAATTTATGGGAATT 812
BSNT_01434___ 813 TCCGAATCTT-GAAACACAAAAAGGG-ATCAAAACTGAGCGTGAACAGCT 860
.||.|| ||| ||||| ||.|||||| |..|||||.||....||.|||||
BPUM_0810___m 813 CCCTAA-CTTGGAAAC-CATAAAGGGAAGAAAAACGGAAAAAGAGCAGCT 860
BSNT_01434___ 861 CATTGCTTTCTTAGAAAACGAATATGGCA----TACAAGCTGATATCAGT 906
.||.|.|||||||.||.|.|| |||| |||||||.||..|..||
BPUM_0810___m 861 AATGGATTTCTTAAAAGAGGA----GGCAGGTGTACAAGCCGAACTTGGT 906
BSNT_01434___ 907 GATCTGCAAGG-----TGTAGTCGAGCATGTTTTCACCCACCTGGTATGG 951
|||.|..|||| | || |||||||.||.||||||||..|.|||
BPUM_0810___m 907 GATTTAGAAGGCACCAT----TC-AGCATGTATTTACCCACCTCATCTGG 951
BSNT_01434___ 952 AATATTTCAGTGTTTTTCGGTAAAGTAAAACA--AGTGTCGGATACCAGC 999
||||||||.||.||.||.|| |.||...||| .||.||.|||..||..
BPUM_0810___m 952 AATATTTCTGTTTTCTTTGG--ACGTGTGACATCTGTATCAGATGACACG 999
BSNT_01434___ 1000 AAGCTGAAAAAAGTAACGAAAGAAGAGCTCGAACAATTTGCGTTCCCGGT 1049
|.||||||||||||.||.|.||||||..|.||...||.|||.||.||.||
BPUM_0810___m 1000 ATGCTGAAAAAAGTGACAACAGAAGAATTTGAGGCATATGCTTTGCCAGT 1049
BSNT_01434___ 1050 ATCACATCAAAAAATCTGGAAGATGGCAGTAGAAGCAGCCGCCATCTCGG 1099
.|||||.||||||||.||||||||||||.|.||||.| ||...|||
BPUM_0810___m 1050 CTCACACCAAAAAATTTGGAAGATGGCACTTGAAGAA----CCTAGTCG- 1094
BSNT_01434___ 1100 CTGCTCCGTAA 1110
|...|||
BPUM_0810___m 1095 ----TATTTAA 1101
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