Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04951 and BPUM_0808
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_04951.1.24716.seq
# -bsequence dna-align/BPUM_0808___yvrH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04951-BPUM_0808___yvrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04951-BPUM_0808___yvrH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: BPUM_0808___yvrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 115/233 (49.4%)
# Similarity: 115/233 (49.4%)
# Gaps: 91/233 (39.1%)
# Score: 385.0
#
#
#=======================================
BSNT_04951 0 -------------------------------------------------- 0
BPUM_0808___y 1 GTGAACGAAGAAAAAATGACGAATGGAGAAATGGAAGAACTCATTGAAAC 50
BSNT_04951 1 ----------ATGATCAGAAAAAAACT-CAGCAATACGTCCTATCAAGAA 39
|||||||.|||.||||| || .||.|||.|.|||||||||
BPUM_0808___y 51 CTTCACACCCATGATCAAAAAGAAACTACA-AAACACGGCATATCAAGAA 99
BSNT_04951 40 AGAGAAGATTTAGAGCAAGAGCTGAAGATCAAAATGTTTGAAAA------ 83
||||||||..||||.|||||.||..|.||||||.|..|.|||||
BPUM_0808___y 100 AGAGAAGACCTAGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGA 149
BSNT_04951 84 --GGCTGATATGCTTTTGTGTCAGGATGTCCCGGGATTTTGGGAGTTTAT 131
|||||||.|.| ||.||.|..||.|||||||||||||||||
BPUM_0808___y 150 CCGGCTGATTTAC--------CAAGAAGGACCTGGATTTTGGGAGTTTAT 191
BSNT_04951 132 TTTG---TACATG--GTAGATGAGAACTCATAA 159
|.|| ||.||| |.||||| |||
BPUM_0808___y 192 TGTGGAATATATGACGAAGATG--------TAA 216
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