Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01423 and BPUM_0799

See Amino acid alignment / Visit BSNT_01423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence dna-align/BSNT_01423___yfhJ.1.24716.seq
#    -bsequence dna-align/BPUM_0799___yfhJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01423___yfhJ-BPUM_0799___yfhJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01423___yfhJ-BPUM_0799___yfhJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01423___yfhJ
# 2: BPUM_0799___yfhJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     169/312 (54.2%)
# Similarity:   169/312 (54.2%)
# Gaps:          81/312 (26.0%)
# Score: 445.5
# 
#
#=======================================

BSNT_01423___      1 ATGAATATG------TACATTGAG----AAACTGACTAATCTGCTTCTGG     40
                           |||      |||.|||||    .|||.||..|||    |..|||
BPUM_0799___y      1 ------ATGGAACAATACTTTGAGCGATTAACAGAACAAT----TAATGG     40

BSNT_01423___     41 AAAAGAACGAGATGATCAGCTATATACAGGCAAA-----AACGTGGGTGG     85
                     ||||.||..|.|||.|.|..|||     |.|.||     .||.|||||.|
BPUM_0799___y     41 AAAAAAATAATATGCTGACATAT-----GACGAAGCGCGTACATGGGTAG     85

BSNT_01423___     86 AATTGTTATGGAGCGATTTCGAAGCAACCTATGCAAAAGCCGGACACGCC    135
                     |.|||.|.|||||.|||||.|||.|.|||||||||||.||.||.|||...
BPUM_0799___y     86 AGTTGCTTTGGAGTGATTTTGAAACGACCTATGCAAAGGCTGGTCACAAG    135

BSNT_01423___    136 TATCAAGGTGAAAAAATGACTGAAAAAATCGTCACACAATGGATTGAAAA    185
                     |||.||||..|..|.|..||||||...||.|||..|.||||||||||.|.
BPUM_0799___y    136 TATAAAGGACAGGACACAACTGAACGGATTGTCCAAGAATGGATTGAGAG    185

BSNT_01423___    186 CTATGGCGGCCAGCTCCACCTTT-TTCAAAGCTCCCGTAACGACGTGAAT    234
                     |||.||.|..|||||.||  ||| |||.||                 |||
BPUM_0799___y    186 CTACGGTGCGCAGCTGCA--TTTATTCCAA-----------------AAT    216

BSNT_01423___    235 GATTACTTAAATCAAA---------------------GCAG-----AGGC    258
                     .|  ||   |||||||                     ||||     |||.
BPUM_0799___y    217 AA--AC---AATCAAAGGCAAACGATCATCTACAAGGGCAGAATAAAGGG    261

BSNT_01423___    259 CTTTTGCATTAA    270
                     .|..|.||||||
BPUM_0799___y    262 TTACTTCATTAA    273


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