Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04983 and BPUM_0751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_04983___yvgO.1.24716.seq
# -bsequence dna-align/BPUM_0751.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04983___yvgO-BPUM_0751.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04983___yvgO-BPUM_0751.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04983___yvgO
# 2: BPUM_0751
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 568
# Identity: 341/568 (60.0%)
# Similarity: 341/568 (60.0%)
# Gaps: 137/568 (24.1%)
# Score: 944.0
#
#
#=======================================
BSNT_04983___ 1 TTGAAA-----CGTATTCGTATC-----CCAATGACACTTGCTCTTGGTG 40
.||||| | |||| |.|| ||..||.||| ||||.||
BPUM_0751 1 ATGAAAAAAACC--ATTC-TTTCTATTGCCCTTGCCAC-TGCTGTT---- 42
BSNT_04983___ 41 CCGCTTTGACAATTGCCCCTTTGTCC----TTTGCTTCCGCTG------- 79
.|||.||||.| .|| ||.|||..|||||
BPUM_0751 43 --TCTTCGACACT----------ACCAGTATTCGCTGACGCTGCTGAGAA 80
BSNT_04983___ 80 AAGAAAATC-----------CTGCTCC-------GAAGATGTCGCAGACA 111
||.||.||| ||.||.| .||..|||...|.|||
BPUM_0751 81 AAAAACATCAGCACCCGTCTCTACTACACTACAGCAAACTGTATTAAACA 130
BSNT_04983___ 112 A--CTGCT---------GCTGGAACAACTGC----CGCTGATGTAGGTTT 146
| |.||| ||||||||.||.|| | ||.||| |
BPUM_0751 131 AAGCAGCTGAAGGAAAAGCTGGAACGACCGCTAGTC-CTAATG------T 173
BSNT_04983___ 147 AAACGTCAATCTGGATGTACTTGGAATTGCCAA--CCA----GATCGCTG 190
.||||||||..|.|||||.|||||.|||||||| ||| ||.|||.|
BPUM_0751 174 TAACGTCAACTTCGATGTTCTTGGGATTGCCAATGCCATTGTGAACGCAG 223
BSNT_04983___ 191 -ATGCCATCAAATCCGCACAGAACAG----GGATGGGTT-----TGTGA- 229
|..| |||||| ||| |||.| ||||..||| |||||
BPUM_0751 224 TAAAC--TCAAAT--GCA---AACCGCCCTGGATTCGTTAAAGGTGTGAT 266
BSNT_04983___ 230 -AAAACCTCATGGAGTCTTCCTTCTACGCATCC----GGCCAAAAATATA 274
.|||.|.|| |||||.|| |.| ||| |.|||||
BPUM_0751 267 GGAAAGCACA-----------TTCTATGC-TGCTGGTGGC---AGATATA 301
BSNT_04983___ 275 ATGTCATGGTCTTTAATTTAAGCCAGGAATATGAAGATCATTTGAACGGT 324
||||.|||||||||||.||||||||..|.||||||||.|..||.||||||
BPUM_0751 302 ATGTTATGGTCTTTAACTTAAGCCAAAATTATGAAGACCGCTTTAACGGT 351
BSNT_04983___ 325 GTGCAA--TTTT---ACGGCTCAGCCGTTTACGACGGCATTACGTATGGC 369
|||.|| |||| ||.|||.|.| ||..||..| ||...|||||.
BPUM_0751 352 GTGAAAACTTTTGCAACTGCTAATC---TTGGGAATG--TTGTTTATGGT 396
BSNT_04983___ 370 ATTTGGGTATTTGAAGATGGAACCTTTACAAACAAAGGCGATGGCGGCT- 418
|||||||||||||||..|||.|||||||.||||||.|||.|||||||||
BPUM_0751 397 ATTTGGGTATTTGAAAGTGGTACCTTTAAAAACAACGGCCATGGCGGCTG 446
BSNT_04983___ 419 GGATCAACTGGGCCTTCAGAGGCTGGTTCGACCGGGATGGCAGCACTGTC 468
|||| ||||||||.||||||||||||||.|||||..|.|..|....|||.
BPUM_0751 447 GGAT-AACTGGGCGTTCAGAGGCTGGTTTGACCGTCAAGATAAATTTGTT 495
BSNT_04983___ 469 GCATTTCATCGCCCTTAA 486
.|.||.|||||.||||||
BPUM_0751 496 ACGTTCCATCGTCCTTAA 513
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