Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01328 and BPUM_0745

See Amino acid alignment / Visit BSNT_01328 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence dna-align/BSNT_01328___yfkC.1.24716.seq
#    -bsequence dna-align/BPUM_0745.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01328___yfkC-BPUM_0745.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01328___yfkC-BPUM_0745.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01328___yfkC
# 2: BPUM_0745
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity:     555/889 (62.4%)
# Similarity:   555/889 (62.4%)
# Gaps:         104/889 (11.7%)
# Score: 1594.0
# 
#
#=======================================

BSNT_01328___      1 ATGAAAGAAACACTTACGGAGATTTTTCAA-AATAAAATCGTCGATATTC     49
                     |||.|.||.|| .||.|.||.|.|..|||| ||.|||..|.|.||.||||
BPUM_0745          1 ATGGACGATAC-TTTTCTGACAGTAGTCAAGAACAAATACATTGAAATTC     49

BSNT_01328___     50 TCCTCGTTGCCGTTATCCTTTGGATCGGTGTCTTTATCATCAAC-CGGCT     98
                     |.||.||||...|..|.||||||.|.|..||||||.|.||.||| ..|| 
BPUM_0745         50 TTCTTGTTGGACTCGTACTTTGGCTTGCCGTCTTTTTGATTAACAAAGC-     98

BSNT_01328___     99 GGTACAGCTATTTTTTAAACGGACGGATTTTATTGAAGAAAAAAAGGAAA    148
                     |.|.||.||.||.||||||||.|||||.|||||.||.||.||.|||.|||
BPUM_0745         99 GCTTCAACTGTTCTTTAAACGAACGGAGTTTATAGAGGACAAGAAGAAAA    148

BSNT_01328___    149 AAACGATTGAAAGCCTTGTCCGTTCTGTCACCCAGTATACGGCGACAATT    198
                     ||||.||.||.|||.|.|||...||.||..|..|.||.||.||..|.|||
BPUM_0745        149 AAACAATCGAGAGCTTGGTCAAATCAGTTTCGAAATACACCGCTTCGATT    198

BSNT_01328___    199 GGTTTTATCTTTTACGTTATTTCTTTATTTGTGCATGATTTCGGCAAGAT    248
                     .|.|||.|..|.||.||.||||||.|.||..|.|||||||||||.||.||
BPUM_0745        199 TGCTTTGTACTATATGTCATTTCTCTCTTCTTTCATGATTTCGGAAAAAT    248

BSNT_01328___    249 ATTGGCCGGGGCGGGCGTAGCAGGTATCGTGATCGGTTTTGGCGCCCAAT    298
                     ..|.||.||.||.||.||.||.||.|||||.|||||||||||||||||..
BPUM_0745        249 TCTTGCAGGTGCTGGTGTGGCTGGGATCGTCATCGGTTTTGGCGCCCAGA    298

BSNT_01328___    299 CGCTGATCAAAGATGTGCTGGCTGGTGTGTTCTTAATATATGAACGCCAG    348
                     ||||.||....|||.|..|.||.||..|.||..|.||.||||||||.|||
BPUM_0745        299 CGCTCATTCGCGATATTTTAGCAGGCATTTTTCTGATCTATGAACGTCAG    348

BSNT_01328___    349 CTGCACAAAGGCGATTATGTCACCGTCAACAACTTGTTCAACGGGACAGT    398
                     .|.||.|||||.||||||||.||.||.||.|||.|.||.||.||.|||.|
BPUM_0745        349 ATTCATAAAGGGGATTATGTGACAGTGAATAACCTCTTTAATGGAACAAT    398

BSNT_01328___    399 GGAGGAAATCGGCCTCCGCTCGCTGCAAATCCGGGAATGGAGCGGGAAGC    448
                     .||.|||||.||.|||||.||.||||||||..|.|||||||||||.||||
BPUM_0745        399 TGAAGAAATTGGTCTCCGTTCTCTGCAAATTAGAGAATGGAGCGGCAAGC    448

BSNT_01328___    449 TGCTCACCATCAGCAACGGCGAGGTCAGACAAATAGAGAACTATAATATT    498
                     ||.|.||.||....|||||.||..||.|.|||||..|.||||||||.||.
BPUM_0745        449 TGTTAACTATTTCTAACGGAGATATCCGGCAAATTCAAAACTATAACATG    498

BSNT_01328___    499 GATTTTATGCGGATTACCGAATCCTTTCTTATCAGCTTT------AAAGA    542
                     .|.|..|||||||||||.||.| ||.|.|||     .||      ||..|
BPUM_0745        499 CACTACATGCGGATTACGGAGT-CTGTATTA-----ATTCGTGCGAATCA    542

BSNT_01328___    543 AGATCCGGACCGCGTGTACAGCGTGT-------TGGAAGAGGCATGTGAC    585
                     |.|.||.|||       |||||.|.|       |.|||..|||.||||||
BPUM_0745        543 AAACCCAGAC-------ACAGCCTTTCAAGCACTCGAAACGGCCTGTGAC    585

BSNT_01328___    586 ATGCTGAATGAAGAGCTTCGTGAT----TCATTGAAGCGGGATGAATTCG    631
                     |...|.|||.||..||..|..|||    |||...||    ||||||||| 
BPUM_0745        586 AATTTAAATCAAATGCACCACGATTTTCTCAAAAAA----GATGAATTC-    630

BSNT_01328___    632 GCA--ATCCGACAGAACCGTTTCAAATCCACGGCATCACCGCATTGAATA    679
                      ||  ||.|||..||||||||||||.||||.|||||.|..|...||||.|
BPUM_0745        631 -CAGCATGCGATTGAACCGTTTCAAGTCCATGGCATTATGGGTCTGAACA    679

BSNT_01328___    680 AAATCAATCGCGGCGTCGAATTTACGGTTAAAGGCATGGTGAAAGATGAT    729
                     |..|.||.|||||..|.||..|.||.||.|||||||||||..||||.||.
BPUM_0745        680 AGCTAAACCGCGGGATTGAGATCACAGTGAAAGGCATGGTCGAAGACGAA    729

BSNT_01328___    730 GATTATTTCAGTGCCAGCCTTGCAGTC-----AGACGGGTTCTCGTTCGC    774
                     .|.||.|||..|||...|||.||.|||     |||...|.||        
BPUM_0745        730 AAATACTTCGATGCTGCCCTCGCTGTCCGAAAAGAAATGATC--------    771

BSNT_01328___    775 CAGCTCTACCAAAACA--------------ATGTGCAAA-TGCTTGAGGA    809
                                |||||              |||| |||| |||||||.||
BPUM_0745        772 -----------AAACAACTTCATCAGCATGATGT-CAAATTGCTTGAAGA    809

BSNT_01328___    810 AGCGGTC-CGAATCGAGAGAACCC----------AATAA    837
                          || ||.||      |.|||          |||||
BPUM_0745        810 -----TCTCGTAT------ATCCCCAGCCTGCAAAATAA    837


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01328 and BPUM_0745

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
