Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01326 and BPUM_0741
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_01326___yfkE.1.24716.seq
# -bsequence dna-align/BPUM_0741___yfkE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01326___yfkE-BPUM_0741___yfkE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01326___yfkE-BPUM_0741___yfkE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01326___yfkE
# 2: BPUM_0741___yfkE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1094
# Identity: 763/1094 (69.7%)
# Similarity: 763/1094 (69.7%)
# Gaps: 67/1094 ( 6.1%)
# Score: 2564.0
#
#
#=======================================
BSNT_01326___ 1 ATGAATCGTATCTTTTTTATTTTAGTGGCGGCCGGTGTTCCGCTTTCTGT 50
|||||||||.|.|||.||.|..|.||.||....|||||.|||.|.|||||
BPUM_0741___y 1 ATGAATCGTTTGTTTCTTGTGATTGTCGCAATTGGTGTGCCGTTATCTGT 50
BSNT_01326___ 51 GATTGGCAGTTTGATGCATTGGCCTTCCGC----GGTTCTATTTGCAGTT 96
||||||||||||..|.|||| |||||| .||..|.|||||.||.
BPUM_0741___y 51 GATTGGCAGTTTTCTTCATT----TTCCGCAAGTCGTCATGTTTGCTGTG 96
BSNT_01326___ 97 TATTGCGTGACGATTATCGCGCTTGCAAGCTATATGGGGAGGGCGACAGA 146
|||||..|..|||||||.|..|||||.||.|.||||||.||.||.|||||
BPUM_0741___y 97 TATTGTATAGCGATTATTGGCCTTGCTAGTTTTATGGGAAGAGCCACAGA 146
BSNT_01326___ 147 ATCACTGTCCATCATTGCAGGACCGCGTATCGGCGGTTTGTTGAATGCCA 196
|...||..|.|||||.||.||.||..|.||.||.||..|.||.||.||||
BPUM_0741___y 147 AAGTCTAGCTATCATAGCTGGTCCAAGAATTGGTGGGCTTTTAAACGCCA 196
BSNT_01326___ 197 CCTTCGGGAATGCGGTGGAGCTGATTATTTCCCTTTTTGCATTAAAAGAA 246
|.||.|||||||||||||||.|.||.||.||..|||||||||||||..||
BPUM_0741___y 197 CATTTGGGAATGCGGTGGAGTTAATCATATCGTTTTTTGCATTAAAGCAA 246
BSNT_01326___ 247 GGCCTGACAGGAATCGTGCTTGCCTCTTTAACCGGTTCAGTGCTGGGGAA 296
||.|||||||..|||||.|||||.||.|||||.||.||||||.|.||.||
BPUM_0741___y 247 GGACTGACAGCCATCGTCCTTGCATCATTAACTGGCTCAGTGATCGGAAA 296
BSNT_01326___ 297 CCTGTTGCTGGTAGCGGGCCTATCGTTTTTTGTCGGCGGTTTAAAATATA 346
..|..||||.||.|||||.||.||.|||||.||.||.|||||||||||||
BPUM_0741___y 297 TTTACTGCTTGTGGCGGGACTGTCTTTTTTCGTTGGTGGTTTAAAATATA 346
BSNT_01326___ 347 AGCGGCAGGAATTTAATATCCATGATGCCCGCCATAACTCCGGGCTT-CT 395
||||.||.|..||.|||.||||.|||||..|.||.|||| ||||||| ||
BPUM_0741___y 347 AGCGCCAAGTGTTCAATGTCCACGATGCAAGGCACAACT-CGGGCTTGCT 395
BSNT_01326___ 396 GATTTTTGCCATCATTGTCGCCTTTGTGATTCCGGAGGTATTCTCTGTTG 445
.||.||||||||.|||||.||.|||||.|||||.||.||.||.||.||.|
BPUM_0741___y 396 CATGTTTGCCATTATTGTGGCGTTTGTTATTCCAGAAGTGTTTTCGGTGG 445
BSNT_01326___ 446 GTATG-----GGAAACGCCAGCAAGCTCAATTTAAGCATCGGCATCAGCA 490
..||| ||||| ||||| .|...||||||.||.||.||.||||
BPUM_0741___y 446 AGATGGCTGAGGAAA----AGCAA-TTTGTTTTAAGTATTGGTATTAGCA 490
BSNT_01326___ 491 TCATTATGATTCTGTTGTATGTGGCGGCGCTGTACTTTAAACTTGTCACG 540
|..|.||||||.||.|.|||||.||.||.||.||.||.|||||.||.|..
BPUM_0741___y 491 TTGTGATGATTTTGCTTTATGTTGCAGCACTCTATTTCAAACTGGTGAGC 540
BSNT_01326___ 541 CATCGGGGCGTTTAT------CAGCCGAATA--ATGCCGCTCAGTCTGAA 582
||.||.||.||.||| .|||.|.|.| ||| ||.
BPUM_0741___y 541 CACCGAGGTGTCTATGTTGCCAAGCAGGAGAGCATG-----------GAC 579
BSNT_01326___ 583 GAAGAGGAAGAG------------CCGGAATGGTCAGGGAAGGTTGCGAC 620
|.|||||..||| ||.||||||||.||.|||.||||.||
BPUM_0741___y 580 GGAGAGGCGGAGACCGAAGAAATTCCTGAATGGTCTGGTAAGTTTGCCAC 629
BSNT_01326___ 621 ---GATTGTCTTGTTTGCGGCAACGATTGTGGTTGCATACATATCCGAAA 667
||||.|..||.|| ||||||||||..|||||.|||||.||.||..
BPUM_0741___y 630 TTTGATTTTGCTGCTT---GCAACGATTGCCGTTGCGTACATTTCAGAGC 676
BSNT_01326___ 668 ACCTGGTCCATACCTTTCACTCGGTTGCTGAACAGTTCGGGTGGAGCGAG 717
.|||.||||||||.|||.|..|.||.|..|||||.||.||.|||||.|||
BPUM_0741___y 677 GCCTCGTCCATACATTTGATACAGTGGGAGAACAATTTGGCTGGAGTGAG 726
BSNT_01326___ 718 CTGTTTATCGGGGTCATCATCGTGGCGATTGTAGGAAATGCGGCGGAGCA 767
|||||||||||.|||||.||.|||||.||.||.||.||||||||.||.||
BPUM_0741___y 727 CTGTTTATCGGAGTCATTATTGTGGCCATCGTCGGCAATGCGGCAGAACA 776
BSNT_01326___ 768 CGCGTCAGCGATTATTATGGCCTTCAAAAATAAAATGGACATTGCGGTTG 817
.||.|||||..|.||||||||.|..|||||.||||||||..|.||.||.|
BPUM_0741___y 777 TGCCTCAGCTGTCATTATGGCGTATAAAAACAAAATGGATGTCGCAGTGG 826
BSNT_01326___ 818 AAATTGCAGTCGGCTCTACGCTGCAGATCGCTATGTTTGTCGCACCGGTT 867
|||||||..|.||.||.||.||.|||.|.||.|||.|.||.|||||..|.
BPUM_0741___y 827 AAATTGCCTTTGGTTCCACACTTCAGGTTGCGATGATGGTGGCACCAATC 876
BSNT_01326___ 868 CTCGTCATCTGTTCTATCTTTTTTCCGACAAGC--ATGCCGCTTGTATTT 915
||.||||||.|||| .|||||||.|.|.|.|| ||||||||..|.||.
BPUM_0741___y 877 CTTGTCATCAGTTC--GCTTTTTTTCAATACGCAGATGCCGCTCATTTTC 924
BSNT_01326___ 916 ACATTGCCTGAGCTCGTCGCGATGGTATCAGCGGTTCTCTTGATGATCGC 965
.|.||.||.||.|||.|.||.|||| ||.|||.|.|.||..|.|..|.
BPUM_0741___y 925 TCTTTACCAGAACTCATTGCAATGG---CATCGGCTGTGTTACTCACAGT 971
BSNT_01326___ 966 GATT---TCGAATGACGGGGATTCCAACTGGTTTGAAGGGGCGACACTGC 1012
.||| ||.||||||||.|||.||||.|||||||||||.||.|||.|.|
BPUM_0741___y 972 CATTTTATCAAATGACGGAGATACCAATTGGTTTGAAGGTGCCACATTAC 1021
BSNT_01326___ 1013 TTGCTGCATATGTCATTATGGCGATCGGCTTTTTCCTTCTTTAA 1056
|||||||.|||.||||.||||||||.||.|||||||||.|.|||
BPUM_0741___y 1022 TTGCTGCCTATTTCATCATGGCGATTGGATTTTTCCTTTTATAA 1065
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