Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01322 and BPUM_0738
See
Amino acid alignment /
Visit
BSNT_01322 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_01322___yfkH.1.24716.seq
# -bsequence dna-align/BPUM_0738___yfkH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01322___yfkH-BPUM_0738___yfkH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01322___yfkH-BPUM_0738___yfkH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01322___yfkH
# 2: BPUM_0738___yfkH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 889
# Identity: 561/889 (63.1%)
# Similarity: 561/889 (63.1%)
# Gaps: 131/889 (14.7%)
# Score: 1697.0
#
#
#=======================================
BSNT_01322___ 1 ATGAGTTTTTTGAAAGAGCT--TTTCAGCAGATACACCCTT-------CA 41
|||.|||||.|.||||.|.| || || ||.||| ||
BPUM_0738___y 1 ATGGGTTTTATTAAAGCGTTAATT------GA---ACGCTTTTTGCTACA 41
BSNT_01322___ 42 TGAAGGA----CAAAGTAAATCAGCGGAGCTGGCGTACTTTTTTCTATTG 87
||||||| || |||||.||.|||||.||.||.||.|||.|..|.
BPUM_0738___y 42 TGAAGGACCGGCA----AAATCTGCTGAGCTTGCCTATTTCTTTTTGCTT 87
BSNT_01322___ 88 TCACTGTTTCCGTTTTTGATTTTTATGCTGACGCTCACCGCGTATCTTCC 137
|||.|.|||||||||.|.||.||..|.|||||.|||...|..|||.|.||
BPUM_0738___y 88 TCATTATTTCCGTTTCTCATCTTCGTACTGACACTCGTTGGATATTTGCC 137
BSNT_01322___ 138 GCTTTCTACCGATGATGTTTTAGGAGTCA----TAGAACAATATGCTCCC 183
.||..|..|..|.|||||..|..|.|||| |.| .|||| |
BPUM_0738___y 138 ACTGACGTCAAAGGATGTCCTGAGTGTCATTTCTGG----TTATG----C 179
BSNT_01322___ 184 GCCA----GTGCGATGTCTCTCG----TTGAATCCATTACCCATCAAACC 225
|||| |.||| ||.||| |||||||||||.||.|.||.||.
BPUM_0738___y 180 GCCAGAAGGAGCG----CTTTCGATGATTGAATCCATTGCCGAACAGACG 225
BSNT_01322___ 226 TTAAATAATCGAAATGGCGGTTTGCTGTCATTCGGGATTATCGCCGCATT 275
.||||||||||.||.|||||.|||.||||.|||||||||||.|||||..|
BPUM_0738___y 226 CTAAATAATCGGAACGGCGGGTTGTTGTCGTTCGGGATTATTGCCGCCCT 275
BSNT_01322___ 276 ATGGTCTGCGTCTAATGGAATGAACGCGATCGTCCGGTCGCTGAACCACG 325
.||||||||.|||||.||.||.||.||..|||||.|..|..|.|||||.|
BPUM_0738___y 276 TTGGTCTGCATCTAACGGTATTAATGCCGTCGTCAGAGCATTTAACCATG 325
BSNT_01322___ 326 CGTATGATGTGGAAGAAAACCGCTCTTTTATCATTGTTCGTTTAACCTCG 375
|.||.||.||.||.||.||.||.||.||.||..|.||.||||||||.|||
BPUM_0738___y 326 CTTACGAAGTTGAGGAGAATCGTTCCTTCATTCTCGTACGTTTAACATCG 375
BSNT_01322___ 376 ATTTTTTTGACGATTGCCATGGTATTTACGATTTTAGTGGCTTTGC---- 421
||..||||.|||||.||.|||||.||.||.|||.| ||||||
BPUM_0738___y 376 ATCATTTTAACGATCGCGATGGTTTTGACCATTAT-----CTTTGCCTTA 420
BSNT_01322___ 422 -TTCTGCCGGTATTTGGCCGGGAGATTGGAAGGCTCGCTT---------C 461
|.|||||.||.||||||...||..|||| || |
BPUM_0738___y 421 ATGCTGCCTGTCTTTGGCAAAGAACTTGG---------TTTATTTGTCGC 461
BSNT_01322___ 462 TGACTTTGTCGGCGC-GTCGGATCTGTTTTTATCCGTCTGGGCCGCCATT 510
|.|.||.||.|| || |||.|||...|||.|..|..|.|||.|.||.||.
BPUM_0738___y 462 TAAATTAGTTGG-GCAGTCAGATGCCTTTCTGACTATATGGACTGCGATG 510
BSNT_01322___ 511 CGCTGGGGTGTCAGCCCGCTTGTGCTTTTGATTGTTTTT---TCCGCGCT 557
.|.|||....|.||||||||..|..|.|||||||||||| |||
BPUM_0738___y 511 AGATGGATCATTAGCCCGCTGATTTTATTGATTGTTTTTACATCC----- 555
BSNT_01322___ 558 GTATGTGA--TTGCGCCGAACA-------------AAAAGCTGTCTCTCC 592
.|||...| ||||.||.|||| ||||
BPUM_0738___y 556 TTATACTATTTTGCTCCAAACATGAGGCTGAAATTAAAA----------- 594
BSNT_01322___ 593 GGTTTGTCATGCCGGGTGCGGTCTTTGCGACCATCGGCTGGATCGTTGTC 642
|||||..||||.|||||..|.|||||..|.||.||.|||||..|.|||
BPUM_0738___y 595 --TTTGTTCTGCCAGGTGCCATTTTTGCATCGATTGGTTGGATTTTGGTC 642
BSNT_01322___ 643 AGCACATTGTTTTCATTTTACGTCAGCACGTTTGCGAACTATAGCGCCAC 692
||||...||||.||||||||.||..||..||||||.|||||.||.||.|.
BPUM_0738___y 643 AGCATGCTGTTCTCATTTTATGTAGGCGAGTTTGCCAACTACAGTGCGAT 692
BSNT_01322___ 693 TTACGGGAGCATCGGGGGAATCATCGTTCTGATGATTTGGTTTTACTTGA 742
.|||||.|||||.||||||||||||.||.|.|||||.||||||||.||.|
BPUM_0738___y 693 GTACGGAAGCATTGGGGGAATCATCATTTTAATGATCTGGTTTTATTTAA 742
BSNT_01322___ 743 GCGGCATTTTAATTATCCTAGGCGGAGAAATCAACGCTCTTTTACATAAA 792
.||||||..|.||||||||.|||||.|||.||||.||.|||||||||||.
BPUM_0738___y 743 CCGGCATCATGATTATCCTTGGCGGCGAACTCAATGCGCTTTTACATAAG 792
BSNT_01322___ 793 CGTAAAAAGCTT---CCTGATGAAAATCCCTACCATTAG 828
||||||| || || |.|.||| |||..|
BPUM_0738___y 793 CGTAAAA---TTGCACC--AGGCAAA---CTATAA---- 819
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.