Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01313 and BPUM_0733
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_01313___yfkM.1.24716.seq
# -bsequence dna-align/BPUM_0733___yfkM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01313___yfkM-BPUM_0733___yfkM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01313___yfkM-BPUM_0733___yfkM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01313___yfkM
# 2: BPUM_0733___yfkM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity: 399/525 (76.0%)
# Similarity: 399/525 (76.0%)
# Gaps: 12/525 ( 2.3%)
# Score: 1466.5
#
#
#=======================================
BSNT_01313___ 1 ATGGGGAAAAAAATTGCAGTTGTTTTAACAGATTATTTTGAGGACAGCGA 50
|||||.||.||||||||||||||.|||||||||||.||||||||....||
BPUM_0733___y 1 ATGGGTAAGAAAATTGCAGTTGTATTAACAGATTACTTTGAGGATGTTGA 50
BSNT_01313___ 51 GTACACTGAGCCTGCGAAAGCCTTTAAAGAAGCGGGACATGAACTGACTG 100
.|.|||.||||||||.||||||||||||||.||.||.||.||..|.||.|
BPUM_0733___y 51 ATTCACCGAGCCTGCAAAAGCCTTTAAAGATGCAGGCCACGAGATCACAG 100
BSNT_01313___ 101 TCATCGAAAAAGAAAAAGGAAAAACAGTAAAAGGCAAGCAGGGAAAAGCG 150
||||.|||||.||||||||.||||||||.|||||.|||||.|||.|.||.
BPUM_0733___y 101 TCATTGAAAATGAAAAAGGTAAAACAGTGAAAGGGAAGCAAGGAGAGGCA 150
BSNT_01313___ 151 GAAGTGACGGTTGACGCGTCCATTGACGACGTAAACCCTTCAGACTTTGA 200
|||||.|..||.||.|||||.||||||.|||||||.|||..||||||.||
BPUM_0733___y 151 GAAGTAAGAGTGGATGCGTCTATTGACAACGTAAAGCCTGAAGACTTCGA 200
BSNT_01313___ 201 TGCGCTTTTGATTCCCGGAGGATTTTCACCAGACCAGCTTCGCGCTGACG 250
|||.|||.|.|||||.||.||.||.||||||||....||.||.||.||.|
BPUM_0733___y 201 TGCACTTCTCATTCCTGGCGGTTTCTCACCAGATATTCTGCGTGCAGATG 250
BSNT_01313___ 251 ATCGTTTCGTCCAATTTACAAAAGCGTTTATGACTGACAAAAAACCGGTA 300
||||||.|||||||||.||.|||||.||||||..|||.||||||||.|||
BPUM_0733___y 251 ATCGTTACGTCCAATTCACTAAAGCATTTATGGATGAGAAAAAACCAGTA 300
BSNT_01313___ 301 TTCGCCATTTGCCACGGCCCGCA---GCT-TTTAATCAATGCGAAAGCGC 346
||.||.||.||.|||||.||||| ||| .||| || ||.|||.|||
BPUM_0733___y 301 TTTGCGATCTGTCACGGACCGCAATTGCTCATTA--CA--GCAAAAACGC 346
BSNT_01313___ 347 TCGACGGCCGAAAAGCGACGGGCTATACGTCCATTCGTGTTGACATGGAA 396
|.||.||..||...|||||.||||||||.|||||....|||||.||||||
BPUM_0733___y 347 TTGAAGGAAGAGGCGCGACTGGCTATACATCCATCAAAGTTGATATGGAA 396
BSNT_01313___ 397 AACGCCGGTGCCGACGTTGT--GGACAAGGAAGTGGTTGTTTGCCAGGAT 444
|||||.||.| |.||.|| | .|||.|.|||||.||.|||||.||||||
BPUM_0733___y 397 AACGCAGGCG-CTACATT-TAAAGACGAAGAAGTCGTCGTTTGTCAGGAT 444
BSNT_01313___ 445 CAATTGGTCACTAGCCGCACACCGGAAGATATACCGGCATTTAACCGCGA 494
||..|.||.||.|||||.|||||.||.||.||.||.||.||||||||.||
BPUM_0733___y 445 CAGCTTGTGACAAGCCGTACACCTGATGACATTCCAGCCTTTAACCGTGA 494
BSNT_01313___ 495 GTCATTGGCATTGCTTGAGAAATAA 519
.|||||...|.|||||||.||||||
BPUM_0733___y 495 ATCATTAAAACTGCTTGAAAAATAA 519
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