Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01289 and BPUM_0719
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:52
# Commandline: needle
# -asequence dna-align/BSNT_01289___yflG.1.24716.seq
# -bsequence dna-align/BPUM_0719___yflG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01289___yflG-BPUM_0719___yflG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01289___yflG-BPUM_0719___yflG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01289___yflG
# 2: BPUM_0719___yflG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 770
# Identity: 546/770 (70.9%)
# Similarity: 546/770 (70.9%)
# Gaps: 40/770 ( 5.2%)
# Score: 1803.0
#
#
#=======================================
BSNT_01289___ 1 ATGATTGTAACAAAC--GATCAAGAATTAGAAGGCCTGAAAAAAA-TCGG 47
.||||||| ||||| |||||.||.|||||| ||||.||||||| ||||
BPUM_0719___y 1 GTGATTGT--CAAACATGATCATGAGTTAGAA-GCCTTAAAAAAAGTCGG 47
BSNT_01289___ 48 AAGAATCGTCGCGCTTGCGCGTGAAGAAATGAAGCGGAAGGCAGAG---- 93
..||||.|||||..|.||..|.||||||||||| |||.|| ||
BPUM_0719___y 48 CCGAATTGTCGCTTTGGCAAGAGAAGAAATGAA----AAGCCA-AGCGAA 92
BSNT_01289___ 94 -CCCGGCATGAGCACAAAAGACCTTGACCTTATCGG--AAAAGCTGTGCT 140
||.||||||...||||||||.||.||..|.||.|| ||||..|.| |
BPUM_0719___y 93 ACCAGGCATGTCTACAAAAGAACTAGATTTGATTGGGAAAAAAATAT--T 140
BSNT_01289___ 141 TGATGAGCACGGCGCCGTTTCAGCTCCTGAGAAGGAATACGATTTTCCAG 190
.||.||.||.||.||...||||||.|||||.||||||||.||.||.||.|
BPUM_0719___y 141 AGAAGAACATGGGGCGAATTCAGCACCTGAAAAGGAATATGACTTCCCTG 190
BSNT_01289___ 191 GCGTGACATGCATCAGCGTAAATGATGAAGTGGCTCACGGCATACCAAGC 240
|...|||.||.||||||||.||.||||||||.||||||||.||.|||||
BPUM_0719___y 191 GAACGACTTGTATCAGCGTGAACGATGAAGTTGCTCACGGTATTCCAAG- 239
BSNT_01289___ 241 ACATCCAAA----ATTTTAAAAGCAGGG-GACCTTGTCAACATCGACATC 285
|..||| ||||||.||| |||| |||||..||||.||.||.||.
BPUM_0719___y 240 ---TGAAAAAACCATTTTACAAG-AGGGCGACCTCATCAATATTGATATT 285
BSNT_01289___ 286 TCCGCTGAATTTGGCGGCTTCTATTCCGACACAGGCATCTCATTTGTGCT 335
||.||.||..|.|.|||||..||||||||.||.|||||.||.||.||..|
BPUM_0719___y 286 TCAGCAGAGCTGGACGGCTATTATTCCGATACCGGCATTTCCTTCGTATT 335
BSNT_01289___ 336 CGGTGAAGGAGAAGAACGCCTTCATAAGC--TTTGCCAATGCGCGGAAAA 383
.|||..|||.||.|..||.||| .|||| |.|||||.||.||.||..|
BPUM_0719___y 336 AGGTACAGGTGATGCTCGTCTT--GAAGCATTATGCCAGTGTGCAGAGGA 383
BSNT_01289___ 384 CGCTTT--TCAAAAGGGGCTT-CAGCAGGCAAAAGCGGGCAAGCGCCAAA 430
.||.|| ||.|| ||.|| .||||.||||||||.|||||..|.||||
BPUM_0719___y 384 TGCATTCCTCGAA---GGATTAAAGCATGCAAAAGCCGGCAAAAGACAAA 430
BSNT_01289___ 431 ACCAGATCGGAAGAGCCGTTTATCATGAAGCACGCTCTCAAGGCTTTACC 480
|.||.||.||..|.||.||.||..||..||||......|||||.|||||.
BPUM_0719___y 431 ATCAAATTGGCCGTGCGGTCTACAATACAGCAAAAGAACAAGGATTTACT 480
BSNT_01289___ 481 GTCATCAAAACCCTGACCGGCCACGGAATCGGCCGAAGCCTGCATGAAGC 530
|||||.||||.||||||.||.||.||.||.||...|||.||.||||||||
BPUM_0719___y 481 GTCATTAAAAACCTGACAGGACATGGCATTGGGAAAAGTCTCCATGAAGC 530
BSNT_01289___ 531 GCCGAATCACATCATGAACTATTATGATCCGTTTGATAACGCACTGTTCA 580
.||.||.||.||..||||||||||||||||.||.|||||.||..||||.|
BPUM_0719___y 531 ACCTAACCATATTTTGAACTATTATGATCCATTCGATAATGCTTTGTTTA 580
BSNT_01289___ 581 AAAATGGCACAGTCATCGCGCTTGAACCGTTTATTTCAACGAAAGCAGAA 630
|.||||||||.||.|||||..|||||||.|||||||||||.||.||.|||
BPUM_0719___y 581 AGAATGGCACCGTGATCGCCTTTGAACCTTTTATTTCAACAAATGCTGAA 630
BSNT_01289___ 631 ACGATTGTTGAAGCTGGAGACGGCTGGACGTTCAAGACGCCGGATAAAAG 680
.|||||..|.|.||||..||.||||||||.||.||.||.||.||||||||
BPUM_0719___y 631 TCGATTTATCAGGCTGATGATGGCTGGACCTTTAAAACACCAGATAAAAG 680
BSNT_01289___ 681 CATGGTTGCCCAAGTTGAACACACGATCGTCATCACAAAAGATGAACCGA 730
|.|.||.||.||..|||||||.||.||.||.||.||||||||.|||||.|
BPUM_0719___y 681 CCTAGTCGCACAGATTGAACATACCATTGTGATTACAAAAGACGAACCAA 730
BSNT_01289___ 731 TTATCCTGACGAAACTGTAA 750
||||..|.||.||.||||||
BPUM_0719___y 731 TTATATTAACAAAGCTGTAA 750
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