Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01285 and BPUM_0717

See Amino acid alignment / Visit BSNT_01285 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence dna-align/BSNT_01285___yflJ.1.24716.seq
#    -bsequence dna-align/BPUM_0717.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01285___yflJ-BPUM_0717.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01285___yflJ-BPUM_0717.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01285___yflJ
# 2: BPUM_0717
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     107/140 (76.4%)
# Similarity:   107/140 (76.4%)
# Gaps:           4/140 ( 2.9%)
# Score: 398.0
# 
#
#=======================================

BSNT_01285___      1 ATGCATTACGGCAGTAAAGGCTGGTATGTGGCAGAACTAAAAAAGCAGGG     50
                     ||||||||.||.||.||||||||||||||.|.||||.||||.||||..||
BPUM_0717          1 ATGCATTATGGTAGCAAAGGCTGGTATGTCGAAGAATTAAAGAAGCTTGG     50

BSNT_01285___     51 GATCACGCACCATGAGGGAAGAAAGCTTCAAAGCTATAAAACCTATTTTC    100
                     ..|.||..|.|||||.|||||||||||||||||||..|||||.|||||.|
BPUM_0717         51 TGTGACCAAGCATGAAGGAAGAAAGCTTCAAAGCTTAAAAACATATTTCC    100

BSNT_01285___    101 TTGCCAACCTGCTTGAAACAAAGAAAAAACAA--TCTTAA    138
                     ||||.||.||.|||||...||||  |||.|.|  ||.|||
BPUM_0717        101 TTGCAAATCTTCTTGAGCAAAAG--AAACCTAGCTCATAA    138


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