Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01267 and BPUM_0698
See
Amino acid alignment /
Visit
BSNT_01267 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_01267.1.24716.seq
# -bsequence dna-align/BPUM_0698.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01267-BPUM_0698.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01267-BPUM_0698.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01267
# 2: BPUM_0698
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity: 131/348 (37.6%)
# Similarity: 131/348 (37.6%)
# Gaps: 189/348 (54.3%)
# Score: 543.0
#
#
#=======================================
BSNT_01267 0 -------------------------------------------------- 0
BPUM_0698 1 ATGAAACCTGTTGTAAGAGAGTATTCAAATGATGAAACACTTCAAAGAGA 50
BSNT_01267 0 -------------------------------------------------- 0
BPUM_0698 51 TGTAGAGCAATTAAAATCACTCGGTGTTGCAAGAGAGGACATTTATGTTC 100
BSNT_01267 0 -------------------------------------------------- 0
BPUM_0698 101 TGTCCCATGACGATGATCGTACAGAGCGTATTGCTGAAAATGCAGATGCC 150
BSNT_01267 1 ---------------------------------------GTGGGAAATAT 11
||.||.|||||
BPUM_0698 151 AATACGATAGGTCCAAGAGAAGTTGGCCTGAAACATGCTGTTGGGAATAT 200
BSNT_01267 12 CTTCAATAAAAAAGGAGACGAGCTCCGCAATAAAATTCACGAAATCGGTT 61
|||.|.||||||.||.||.||||||||.||||||||.||.|||.|.||||
BPUM_0698 201 CTTTAGTAAAAAGGGCGATGAGCTCCGAAATAAAATCCATGAAGTTGGTT 250
BSNT_01267 62 TTTCTGAAGATGAAGCCGCTCAATTTGAAAAACGCTTAGATGAAGGAAAA 111
|.|||.||||.|||||.|...||||||||.|||..|||||||||||.|||
BPUM_0698 251 TCTCTAAAGAAGAAGCTGAGAAATTTGAAGAACATTTAGATGAAGGGAAA 300
BSNT_01267 112 GTGCTTCTCTTTGTGACAGATAACGAAAAAGTGAAAGCTTGGGCATAA 159
||.|||||||||||||||||..|.||||||||||||.|||||||||||
BPUM_0698 301 GTCCTTCTCTTTGTGACAGACCATGAAAAAGTGAAAACTTGGGCATAA 348
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.