Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03141 and BPUM_0688
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_03141___yocN.1.24716.seq
# -bsequence dna-align/BPUM_0688___yocN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03141___yocN-BPUM_0688___yocN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03141___yocN-BPUM_0688___yocN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03141___yocN
# 2: BPUM_0688___yocN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 182/235 (77.4%)
# Similarity: 182/235 (77.4%)
# Gaps: 2/235 ( 0.9%)
# Score: 686.0
#
#
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BSNT_03141___ 1 ATGTTCTTTTCTCCCTCCGTCGTGAATGTCGGCGGATTTAAAATCAATAC 50
|||||.||.||.|||||.|||||.||||||||.|..||||||.|||||.|
BPUM_0688___y 1 ATGTTATTCTCACCCTCAGTCGTCAATGTCGGTGCTTTTAAAGTCAATGC 50
BSNT_03141___ 51 AATGGACCGTGGTTCCTCTTTAACACTCGGTCCGTATCAGCAGGTCGATT 100
||||||.||.|||.|.||..|.||.||.||.||.||||||||||||||||
BPUM_0688___y 51 AATGGATCGGGGTGCATCACTGACGCTAGGACCTTATCAGCAGGTCGATT 100
BSNT_03141___ 101 ACTTTTTATCAGCT-AAAATAAATCAAGGGTTTGGAGAAGAAAATGGCGA 149
|.|||.|.|| |.| |||.|.||.|||||.||||||||.||.|||||.||
BPUM_0688___y 101 ATTTTCTCTC-GATGAAATTGAACCAAGGATTTGGAGAGGACAATGGTGA 149
BSNT_03141___ 150 CTTTACTCCTCTTGTCGTACCGATTTCAAATGTATTAGATGCAGATCTTG 199
.|.|.|.||.||||||.|.||||||||||.|||.||||||.|||||.|.|
BPUM_0688___y 150 TTGTTCACCGCTTGTCATTCCGATTTCAAGTGTGTTAGATCCAGATATGG 199
BSNT_03141___ 200 TTGATTCGAACTCAGCGAAAAACAGTGTGGTGTAA 234
|.|||||.||.||||..||||||||.|||||.|||
BPUM_0688___y 200 TAGATTCAAATTCAGTCAAAAACAGCGTGGTTTAA 234
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