Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01244 and BPUM_0677
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_01244___yfnG.1.24716.seq
# -bsequence dna-align/BPUM_0677___yfnG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01244___yfnG-BPUM_0677___yfnG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01244___yfnG-BPUM_0677___yfnG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01244___yfnG
# 2: BPUM_0677___yfnG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1011
# Identity: 736/1011 (72.8%)
# Similarity: 736/1011 (72.8%)
# Gaps: 48/1011 ( 4.7%)
# Score: 2650.5
#
#
#=======================================
BSNT_01244___ 1 ---------------------------------TTGAG----TTTCTGGA 13
.|||| ||| ||||
BPUM_0677___y 1 ATGGAAAACAACCATGGAAGGTTTGGTGACGGAATGAGCGGATTT-TGGA 49
BSNT_01244___ 14 AAAATAAAAACGTATTTGTCACGGGATGCACAGGTCTTTTAGGAAGCTAT 63
|....||||||||||||||.||.|||||.|||||..|.||.|||||||||
BPUM_0677___y 50 ATGGGAAAAACGTATTTGTGACTGGATGTACAGGGTTATTGGGAAGCTAT 99
BSNT_01244___ 64 TTGGTGAAAGAGCTGATTGAACAGGGCGCAAACGTTACGGGGCTTGTCAG 113
.|.||.||.||..|||||||.||.||.|||||.||.||.||.|||||..|
BPUM_0677___y 100 CTCGTCAAGGAATTGATTGATCAAGGGGCAAATGTAACTGGACTTGTGCG 149
BSNT_01244___ 114 GGATCATGTGCCTCAATCCAATCTTTATC-AGGGAGAACATATCAAGAAA 162
.|||||.|||||.|.|||.|||.|.|||| |||.||...||.|.|| |||
BPUM_0677___y 150 TGATCAGGTGCCACGATCGAATTTATATCAAGGCAGTCAATTTGAA-AAA 198
BSNT_01244___ 163 ATGAACATCGTGCGGGGCTCTCTTGAGGACTTGGCTGTGATTGAACGCGC 212
|||||..|.||||..|||.|..|.|||||..||.....|||||||||.||
BPUM_0677___y 199 ATGAATGTGGTGCAAGGCGCATTGGAGGATATGCAAACGATTGAACGTGC 248
BSNT_01244___ 213 GCTTGGCGAGTATGAGATCGACACTGTCTTTCATCTTGCTGCACAAGCGA 262
|.|.||.||.||.||.||.||.||||||||||||||.|||||.|||||.|
BPUM_0677___y 249 GTTAGGAGAATACGAAATTGATACTGTCTTTCATCTGGCTGCCCAAGCCA 298
BSNT_01244___ 263 TTGTCGGCGTGGCAAACCGCAACCCGATTTCTACCTTTGAAGCGAATATC 312
||||.||.||.|||||..|..||||..||||.||.||||||||.|||||.
BPUM_0677___y 299 TTGTAGGGGTTGCAAATAGACACCCTGTTTCCACATTTGAAGCCAATATT 348
BSNT_01244___ 313 CTCGGTACATGGAATATTCTCGAAGCCTGCCGCAAG-CATCCGTTAATTA 361
.|.||.|||||||||.|.||.||.||.||..| ||| ||.|||.||||.|
BPUM_0677___y 349 TTAGGGACATGGAATGTGCTAGAGGCTTGTAG-AAGACAGCCGCTAATCA 397
BSNT_01244___ 362 AGCGGGTCATTGTCGCTTCAAGTGATAAAGCTTACGGCGATCAAGAAAAC 411
|.||.|||||.||.||.||||||||||||||.|||||||||||.||..|.
BPUM_0677___y 398 AACGAGTCATCGTGGCATCAAGTGATAAAGCATACGGCGATCAGGAGCAG 447
BSNT_01244___ 412 CTTCCATACGATGAAAACATGCCGCTGCAAGGCAAGCACCCGTACGACGT 461
|||||||||||||||.||||||||||..|.||.||.||.|||||.||.||
BPUM_0677___y 448 CTTCCATACGATGAAGACATGCCGCTAAATGGGAAACATCCGTATGATGT 497
BSNT_01244___ 462 CTCAAAAAGCTGCGCAGATCTGATCAGCCACACCTATTTTCACACGTACG 511
.|||||.|||||.||||||.|.||....|||||.||||...||||.||.|
BPUM_0677___y 498 ATCAAAGAGCTGTGCAGATTTAATTTCTCACACGTATTACAACACATATG 547
BSNT_01244___ 512 GGCTTCCGGTCTGCATTACGCGCTGCGGAAACTTATACGGCGGCGGAGAT 561
|.||.|||||.||.||.|||||||||||.||.||||||||.|||||.|||
BPUM_0677___y 548 GTCTCCCGGTTTGTATCACGCGCTGCGGCAATTTATACGGGGGCGGGGAT 597
BSNT_01244___ 562 TTGAACTTCAACCGCATCATTCCTCAGACGATTCAGCTTGTGCTGAACGG 611
|||||.||||||.|.||||||||.||.||.||.||||||||||||.|.||
BPUM_0677___y 598 TTGAATTTCAACAGAATCATTCCGCAAACCATCCAGCTTGTGCTGGAAGG 647
BSNT_01244___ 612 GGAAGCGCCGGAAATCCGAAGCGACGGTACCTTTGTACGGGACTACTTCT 661
|||||||||.|||||..||||.||.||.||.|||.|.||.||.||.||||
BPUM_0677___y 648 GGAAGCGCCTGAAATTAGAAGTGATGGGACATTTATTCGTGATTATTTCT 697
BSNT_01244___ 662 ATATTGAAGACGCCGTTCAGGCTTATCTGCTTCTTGCAGAAAAAATGGAA 711
||||||||||.||.|||.||||||||.||||.||.||.||.||.|||||.
BPUM_0677___y 698 ATATTGAAGATGCGGTTAAGGCTTATTTGCTGCTAGCTGAGAAGATGGAG 747
BSNT_01244___ 712 GAAAACAATCTTGCCGGAGAGGCCTTTAACTTCAGCAATGAGATCCAGCT 761
||.||....||.||.|||||.||.||||||||.||.|||||.||.|||||
BPUM_0677___y 748 GAGAAAGGGCTCGCTGGAGAAGCATTTAACTTTAGTAATGAAATTCAGCT 797
BSNT_01244___ 762 GACCGTACTTGAACTGGTAGAGAAAATATTAAAGAAAATGAACAGTAATC 811
|||.||.|||||.||.||.||.||.||.||||||..||||..||||.|.|
BPUM_0677___y 798 GACGGTTCTTGAGCTCGTGGATAAGATTTTAAAGGCAATGGGCAGTGAAC 847
BSNT_01244___ 812 TGAAACCTAAGGTGCTGAATCAGGGAA-GCAATGAAATCAAACATCAATA 860
||||.|||....|.||.|||||.|||| || ||||.|||||.||.|||||
BPUM_0677___y 848 TGAAGCCTCGTATTCTAAATCAAGGAACGC-ATGAGATCAAGCACCAATA 896
BSNT_01244___ 861 TTTATCCGCGGAAAAAGCAAGAAAGCTGCTGAATTGGACACCGGCCTACA 910
|||.||.||.|||||.||.|||||||||||..||||||..||.|.||||.
BPUM_0677___y 897 TTTGTCGGCAGAAAAGGCGAGAAAGCTGCTTGATTGGAAGCCTGACTACT 946
BSNT_01244___ 911 CCATTGATGAGGGACTTGAAAAAACGATTGAGTGGTATACG-GAATTC-T 958
||||||||||.||..|.||.||.||||||||.||||| .|| |||||| |
BPUM_0677___y 947 CCATTGATGAAGGGTTAGAGAAGACGATTGAATGGTA-CCGCGAATTCTT 995
BSNT_01244___ 959 TCAAAAAGTAA 969
||||||| ||.
BPUM_0677___y 996 TCAAAAA-TAG 1005
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