Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01148 and BPUM_0646
See
Amino acid alignment /
Visit
BSNT_01148 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_01148___gatB.1.24716.seq
# -bsequence dna-align/BPUM_0646___gatB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01148___gatB-BPUM_0646___gatB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01148___gatB-BPUM_0646___gatB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01148___gatB
# 2: BPUM_0646___gatB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1443
# Identity: 1184/1443 (82.1%)
# Similarity: 1184/1443 (82.1%)
# Gaps: 24/1443 ( 1.7%)
# Score: 4854.0
#
#
#=======================================
BSNT_01148___ 1 TTGAACTTTGAAACGGTAATCGGACTTGAAGTCCACGTTGAGTTAAAAAC 50
.|||||||||||||||||||.|||||||||||||||||||||.|||||||
BPUM_0646___g 1 ATGAACTTTGAAACGGTAATTGGACTTGAAGTCCACGTTGAGCTAAAAAC 50
BSNT_01148___ 51 AAAATCAAAAATTTTCTCAAGCTCTCCAACGCCATTCGGCGCGGAGGCGA 100
|.||||||||||||||||.|||||.||.||.||.||.||.||.|..||.|
BPUM_0646___g 51 ACAATCAAAAATTTTCTCCAGCTCGCCGACACCTTTTGGTGCAGCTGCCA 100
BSNT_01148___ 101 ATACGCAGACAAGCGTTATTGACCTCGGATATCCGGGCGTCCTGCCTGTT 150
|.|||||.|||||.||.||.|||||.||||||||.|||||.||||||||.
BPUM_0646___g 101 ACACGCAAACAAGTGTCATCGACCTTGGATATCCTGGCGTACTGCCTGTA 150
BSNT_01148___ 151 CTGAACAAAGAAGCCGTTGAA-TTCGCAATGAAAGCCGCTATGGCGCTCA 199
.|||||||||||| ||.|||| ||.|||||||||||.||.||||||||.|
BPUM_0646___g 151 TTGAACAAAGAAG-CGGTGAACTTTGCAATGAAAGCAGCCATGGCGCTAA 199
BSNT_01148___ 200 ACTGTGAGATCGCAACGGATACGAAGTTTGACCGCAAAAACTATTTCTAT 249
||||.|||||||||||.|||||.||.||||||||.||||||||.||||||
BPUM_0646___g 200 ACTGCGAGATCGCAACAGATACAAAATTTGACCGTAAAAACTACTTCTAT 249
BSNT_01148___ 250 CCTGACAACCCGAAAGCGTATCAGATTTCTCAATTTGATAAGCCAATCGG 299
|||||.|||||.||.||||||||.|||||||||||||||||.||.|||||
BPUM_0646___g 250 CCTGATAACCCAAAGGCGTATCAAATTTCTCAATTTGATAAACCGATCGG 299
BSNT_01148___ 300 CGAAAACGGCTGGATCGAAATTGAAGTCGGCGGCAAAACAAAACGCATCG 349
.||||||||||||||.|||||||||||.|..||.|||||.|||||.||.|
BPUM_0646___g 300 TGAAAACGGCTGGATTGAAATTGAAGTAGAAGGTAAAACGAAACGAATTG 349
BSNT_01148___ 350 GCATCACGCGCCTTCATCTTGAAGAGGATGCCGGAAAACTGACGCATACG 399
|.||.|||||.||.|||.|.|||||||||||.||.||||||||||||||.
BPUM_0646___g 350 GTATTACGCGTCTCCATTTGGAAGAGGATGCAGGTAAACTGACGCATACA 399
BSNT_01148___ 400 GGCGACGGCTATTCTCTTGTTGACTTCAACCGTCAAGGAACGCCGCTTGT 449
||||||||.|||||.|||||.||.||||||||||||||.||.||||||||
BPUM_0646___g 400 GGCGACGGATATTCACTTGTCGATTTCAACCGTCAAGGCACACCGCTTGT 449
BSNT_01148___ 450 TGAGATCGTATCAGAGCCGGACATCCGCACGCCGGAAGAAGCGTACGCGT 499
|||.||||||||.|||||.|||||.|||||.||.||||||||.||.||||
BPUM_0646___g 450 TGAAATCGTATCTGAGCCAGACATTCGCACACCAGAAGAAGCATATGCGT 499
BSNT_01148___ 500 ATCTT-GAAAAGCTGAAATCCATCATCCAGTATACAGGCGTTTCTGACTG 548
| ||| |||||.||.||||||||.||.||.|||||||||||.||||||||
BPUM_0646___g 500 A-CTTAGAAAAACTAAAATCCATTATTCAATATACAGGCGTATCTGACTG 548
BSNT_01148___ 549 TAAAATGGAAGAAGGCTCACTTCGCTGTGACGCCAATATCTCTCTTCGTC 598
|||.|||||||||||||||||.||||||||.|||||.||.||.|||||||
BPUM_0646___g 549 TAAGATGGAAGAAGGCTCACTGCGCTGTGATGCCAACATTTCACTTCGTC 598
BSNT_01148___ 599 CGATCGGCCAAGAGGAATTTGGCACAAAAACAGAATTGAAAAACTTGAAC 648
|||||||.|..||.||.|||||.||.||||||||..|.||.|||||||||
BPUM_0646___g 599 CGATCGGTCGTGAAGAGTTTGGAACGAAAACAGAGCTCAAGAACTTGAAC 648
BSNT_01148___ 649 TCCTTTGCGTTTGTTCAAAAAGGCCTTGAGCAT--GAAGAAAAACGCCAG 696
||.|||||.||.||.||||||||.||||| || |||||.|||||.||.
BPUM_0646___g 649 TCATTTGCTTTCGTACAAAAAGGTCTTGA--ATTCGAAGAGAAACGTCAA 696
BSNT_01148___ 697 GAGCAGGTTCTTCTTTCCGGCGGCGTCATCCAGCAAGAAACTCGCCGTTA 746
|||||.||..|.|||||.||||||.|.|||.|.||||||||||||||.||
BPUM_0646___g 697 GAGCAAGTATTGCTTTCTGGCGGCTTGATCGAACAAGAAACTCGCCGCTA 746
BSNT_01148___ 747 TGATGAAGCAACGAAGAAAACCATTCTTATGCGTGTCAAAGAGGGATCTG 796
|||||||||..|.||.||.||.|||||.||||||||||||||.||.||||
BPUM_0646___g 747 TGATGAAGCGTCTAAAAAGACGATTCTGATGCGTGTCAAAGAAGGTTCTG 796
BSNT_01148___ 797 ACGACTACCGTTACTTCCCAGAGCCGGATCTAGTCGAGCTCTACATTGAT 846
|.||.|||||.||.||||||||.||.|||.||||.|||||.|||||||||
BPUM_0646___g 797 ATGATTACCGCTATTTCCCAGAACCAGATTTAGTGGAGCTGTACATTGAT 846
BSNT_01148___ 847 GATGAATGGAAGGAACGCGTAAAAGCAAGCATTCCTGAGCTTCCGGATGA 896
||.||.|||||.|||||.||||.||||...||.||.||||||||.||.||
BPUM_0646___g 847 GACGAGTGGAAAGAACGTGTAAGAGCATCGATCCCAGAGCTTCCAGACGA 896
BSNT_01148___ 897 GCGCCGCAAGCGTTATATCGAAGAGCT-TGGCTTGCCTGCATATGACGCG 945
|||||||||.||.||.|||||.||.|| .||||| |||||||||||.|||
BPUM_0646___g 897 GCGCCGCAAACGCTACATCGATGATCTAGGGCTT-CCTGCATATGATGCG 945
BSNT_01148___ 946 ATGGTTCTGACGCTGACAAAAGAAATGGCTGATTTCTTCGAAGAAACCGT 995
|||||.|||||||||||||||||||||.||||||||||.||||.||||.|
BPUM_0646___g 946 ATGGTACTGACGCTGACAAAAGAAATGTCTGATTTCTTTGAAGCAACCAT 995
BSNT_01148___ 996 TCAAAAAGGCGCTGAAGCCAAACAAGCGTCTAACTGGCTGATGGGTGAAG 1045
|..|.||||.||.|||||.||.|||||.||.||||||||.|||||.||||
BPUM_0646___g 996 TACAGAAGGTGCAGAAGCGAAGCAAGCATCGAACTGGCTAATGGGCGAAG 1045
BSNT_01148___ 1046 TGTCAGCTTACCTAAACGCTGAGCAAAAAGAGCTTGCCGAT-----GTTG 1090
|.||.||||||.|||||.|.|..|||||||||||.|..||| |
BPUM_0646___g 1046 TATCTGCTTACTTAAACTCAGCTCAAAAAGAGCTGGAAGATACAAAG--- 1092
BSNT_01148___ 1091 CCCTGACACCTGAAGGCCTTGCCGGCATGATCAAATTGATTGAAAAAGGA 1140
||.||.||..|||||||.||.|||||||||||..|.||||||||||||
BPUM_0646___g 1093 --CTAACGCCGCAAGGCCTGGCTGGCATGATCAAGCTCATTGAAAAAGGA 1140
BSNT_01148___ 1141 ACCATTTCTTCTAAGATCGCGAAGAAAGTGTTTAAAGAATTGATTGAAAA 1190
||.||||||||||||||.||.||.||.||.||.|||||..||||||||||
BPUM_0646___g 1141 ACGATTTCTTCTAAGATTGCCAAAAAGGTATTCAAAGAGCTGATTGAAAA 1190
BSNT_01148___ 1191 AGGCGGCGACGCTGAGAAGATTGTGAAAGAGAAAGGCCTTGTTCAGATTT 1240
.||.||.|||||.||.|..||.||.|||||.|||||.|||||.||.||||
BPUM_0646___g 1191 TGGGGGAGACGCAGAAACAATCGTCAAAGAAAAAGGACTTGTCCAAATTT 1240
BSNT_01148___ 1241 CTGACGAAGGCGTGC--TTCTGAAGCTTGTCACTGAGGCGCTTGACAACA 1288
||||||||| |||| |.||.||.|||||.||.||.||.|||||.||||
BPUM_0646___g 1241 CTGACGAAG--GTGCCTTGCTCAAACTTGTGACAGAAGCACTTGATAACA 1288
BSNT_01148___ 1289 ATCCTCAATCAATCGAAGACTTTAAAAACGGAAAAGACCGCGCGATCGGC 1338
|.||.|||||.|||||||||||||.|||.|||||||||||||||||.||.
BPUM_0646___g 1289 ACCCGCAATCTATCGAAGACTTTAGAAATGGAAAAGACCGCGCGATTGGT 1338
BSNT_01148___ 1339 TTCCTAGTCGGACAGATTATGAAAGCGTCCAAAGGACAAGCCAACCCGCC 1388
|||.||||||||||.||.||||||||.||.||.||||||||.||||||||
BPUM_0646___g 1339 TTCTTAGTCGGACAAATCATGAAAGCATCGAAGGGACAAGCAAACCCGCC 1388
BSNT_01148___ 1389 GATGGTCAACAAAATTCTGCTTGAAGAAATTAAAAAACGCTAA 1431
||||||||||||.|||||.||.||||||||.||||||||||||
BPUM_0646___g 1389 GATGGTCAACAAGATTCTCCTAGAAGAAATCAAAAAACGCTAA 1431
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.