Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01146 and BPUM_0644

See Amino acid alignment / Visit BSNT_01146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_01146___gatC.1.24716.seq
#    -bsequence dna-align/BPUM_0644___gatC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01146___gatC-BPUM_0644___gatC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01146___gatC-BPUM_0644___gatC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01146___gatC
# 2: BPUM_0644___gatC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     240/291 (82.5%)
# Similarity:   240/291 (82.5%)
# Gaps:           0/291 ( 0.0%)
# Score: 996.0
# 
#
#=======================================

BSNT_01146___      1 ATGTCACGAATTTCAATAGAAGAAGTAAAGCACGTTGCGCACCTTGCAAG     50
                     |||||..||||||||||||||||||||||||||||.|||||..|.|||.|
BPUM_0644___g      1 ATGTCTAGAATTTCAATAGAAGAAGTAAAGCACGTGGCGCATTTGGCACG     50

BSNT_01146___     51 ACTTGCGATTACTGAAGAAGAAGCAAAAATGTTCACTGAACAGCTCGACA    100
                     .|||||.|||||.|||||||||||..|||||||.|||||.|||||.||.|
BPUM_0644___g     51 GCTTGCAATTACAGAAGAAGAAGCTGAAATGTTTACTGAGCAGCTTGATA    100

BSNT_01146___    101 GTATCATTTCATTTGCCGAGGAGCTTAATGAGGTTAACACAGACAATGTG    150
                     |.||||||||||||||.|||.||.|.||.|||||..|.||.||.||.||.
BPUM_0644___g    101 GCATCATTTCATTTGCAGAGCAGTTAAACGAGGTAGATACGGAAAACGTT    150

BSNT_01146___    151 GAGCCTACAACTCACGTGCTGAAAATGAAAAATGTCATGAGAGAAGATGA    200
                     ||.||.|||||.|||||..|.|||||||||||.||||||||||||||||.
BPUM_0644___g    151 GAACCAACAACACACGTATTAAAAATGAAAAACGTCATGAGAGAAGATGT    200

BSNT_01146___    201 AGCGGGTAAAGGTCTTCCGGTTGAGGATGTCATGAAAAATGCGCCTGACC    250
                     ..||..||||||||||.|..||||||..||.||.|||||.||||||||.|
BPUM_0644___g    201 TCCGAATAAAGGTCTTTCCATTGAGGCAGTTATCAAAAACGCGCCTGATC    250

BSNT_01146___    251 ATAAAGACGGCTATATTCGTGTGCCATCAATTCTGGACTAA    291
                     ||||||||||||||||||||||||||||||||.||||||||
BPUM_0644___g    251 ATAAAGACGGCTATATTCGTGTGCCATCAATTTTGGACTAA    291


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