Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01127 and BPUM_0619
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence dna-align/BSNT_01127___yerC.1.24716.seq
# -bsequence dna-align/BPUM_0619___yerC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01127___yerC-BPUM_0619___yerC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01127___yerC-BPUM_0619___yerC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01127___yerC
# 2: BPUM_0619___yerC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 245/328 (74.7%)
# Similarity: 245/328 (74.7%)
# Gaps: 26/328 ( 7.9%)
# Score: 936.5
#
#
#=======================================
BSNT_01127___ 1 ATGCAAATCGATAAATTACGCGGCAAAGAGC-TGGACCAGTTATTTAACT 49
||||||||.|||||||||.|.|||||| ||| |.||.||||||||.||||
BPUM_0619___y 1 ATGCAAATTGATAAATTAAGGGGCAAA-AGCTTAGATCAGTTATTCAACT 49
BSNT_01127___ 50 CGATCTTATCGCTGAAAGACCTGGAGGAATGTTACCGATTCTTCGATGAT 99
|.||||||||.||.|||||||||||.|||||.||.||||||||.||||||
BPUM_0619___y 50 CCATCTTATCCCTTAAAGACCTGGAAGAATGCTATCGATTCTTTGATGAT 99
BSNT_01127___ 100 CTATGCACAATTAACGAAATTCAATCGCTGGCTCAGCGCCTTGAAGTGGC 149
.|.||.||.||.||.|||||||||||..|..|.|||||.||||||||.||
BPUM_0619___y 100 TTGTGTACCATCAATGAAATTCAATCTTTATCACAGCGTCTTGAAGTAGC 149
BSNT_01127___ 150 GCGCATGCTTCGCGAAGGAAACACGTATCATAAGATTGAAACAGAAACAG 199
.||.|||||||||||.|||||||||||||||||.|||||.||.||.||||
BPUM_0619___y 150 ACGTATGCTTCGCGAGGGAAACACGTATCATAAAATTGAGACGGAGACAG 199
BSNT_01127___ 200 GCGCTTCCACGGCTACGATTTCCCGTGTGAAACGCTGCTTAAATTACGGG 249
|.||...|||.||.||.||.||.||.||.|||||||||||.||.|||||.
BPUM_0619___y 200 GTGCAAGCACTGCAACCATCTCACGAGTCAAACGCTGCTTGAACTACGGA 249
BSNT_01127___ 250 AATGACGCTTATGAAATGGCGCTTGACCGTGT---------GAAGGAGAA 290
||.||.||.|||..||||||.||||||||.|| |.|||..||
BPUM_0619___y 250 AACGATGCCTATACAATGGCACTTGACCGCGTAGCAGAACAGCAGGCAAA 299
BSNT_01127___ 291 T---GAAACAGAGTCTTCTTCCAAATAA 315
| |||||| ||||||
BPUM_0619___y 300 TGACGAAACA------------AAATAA 315
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