Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01107 and BPUM_0601
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_01107___purQ.1.24716.seq
# -bsequence dna-align/BPUM_0601___purQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01107___purQ-BPUM_0601___purQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01107___purQ-BPUM_0601___purQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01107___purQ
# 2: BPUM_0601___purQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity: 538/702 (76.6%)
# Similarity: 538/702 (76.6%)
# Gaps: 36/702 ( 5.1%)
# Score: 2055.5
#
#
#=======================================
BSNT_01107___ 1 GTGAAATTTGCGGTGATTGTGTTACCCGGCTCCAACTGTGATATCGATAT 50
|||||.|||||.|||||.||.||.||.|||||.|||||||||||||||||
BPUM_0601___p 1 GTGAAGTTTGCAGTGATCGTCTTGCCTGGCTCTAACTGTGATATCGATAT 50
BSNT_01107___ 51 GTATCATGCTGTAAAGGATGAGCTCGGCCATGAAGTGGAATACGTCTGGC 100
|||.|||||..|..|.||||||.|.||..|..||||.|||||.||.||||
BPUM_0601___p 51 GTACCATGCGATTCAAGATGAGTTAGGTGAACAAGTTGAATATGTATGGC 100
BSNT_01107___ 101 ATGAGGAAACAAGTCTTGACGGCTTCGACGGCGTGTTAATTCCGGGAGGA 150
|.||.|||||.||||||||.||.||.|||||.||..|..|.||.||.||.
BPUM_0601___p 101 ACGACGAAACGAGTCTTGATGGTTTTGACGGTGTACTCGTACCAGGCGGT 150
BSNT_01107___ 151 TTTTCTTACGGCGATTACTTAAGATGCGGTGCCATCGCCCGATTTGCGAA 200
||.|||||.||.||||||||||||||||||||.||.||.||.|||.|.||
BPUM_0601___p 151 TTCTCTTATGGGGATTACTTAAGATGCGGTGCGATTGCTCGCTTTTCAAA 200
BSNT_01107___ 201 TATTATGCCAGCTGTCAAACAAGCAGCGGCTGAAGGAAAACCTGTTCTTG 250
.||.|||||.||.||.|||.|||||||.||.|||||||||||||||||||
BPUM_0601___p 201 CATCATGCCGGCGGTGAAAAAAGCAGCTGCGGAAGGAAAACCTGTTCTTG 250
BSNT_01107___ 251 GCGTCTGTAACGGATTCCAGATTTTACAGGAGCTTGGGCTGCTGCCAGGC 300
|.||.||||||||.|||||.|||.|.|||||||||||..|.||.|||||.
BPUM_0601___p 251 GTGTTTGTAACGGGTTCCAAATTCTTCAGGAGCTTGGCATTCTTCCAGGT 300
BSNT_01107___ 301 GCAATGAGACGCAACAAAGATCTGAAGTTCATTTGCCGTCCGGTTGAATT 350
|||||||||||.||.|||||..|.||.||.||.||.|||||.||||||.|
BPUM_0601___p 301 GCAATGAGACGAAATAAAGACTTAAAATTTATCTGTCGTCCAGTTGAACT 350
BSNT_01107___ 351 GATTGTTCAGAACGACGAAACCTTATTCACA----GCT-TCCTACGAAAA 395
.|||||..|||||.|||||||...|||.||| ||| || ||||
BPUM_0601___p 351 CATTGTAGAGAACAACGAAACGCAATTTACAAGCGGCTATC-----AAAA 395
BSNT_01107___ 396 GGGAGAATCGATTACAATCCCGGTTGCCCATGGTGAAGGGAATTTCTACT 445
.||.|||||.|||.|..|.||.||.||.||.||||||||.||.|||||||
BPUM_0601___p 396 AGGCGAATCCATTTCGGTTCCTGTAGCGCACGGTGAAGGCAACTTCTACT 445
BSNT_01107___ 446 GTGATGACGAGACGCTT--GCTACATTAAAG------GAAAACAATCAAA 487
||||||| ||||.||| || |||| |||||.||.||||
BPUM_0601___p 446 GTGATGA--AGACACTTTAGC------AAAGCTTATTGAAAATAACCAAA 487
BSNT_01107___ 488 TTGCTTTCACATACGGCTCTA----ATATTAATGGAAGTGTC-AGCGACA 532
|.||||||||.||||| | |||||||.||.|||||| |.||| |
BPUM_0601___p 488 TCGCTTTCACTTACGG----AGACGATATTAACGGTAGTGTCAATCGA-A 532
BSNT_01107___ 533 TTGCCGGTGTCGTGAATGAGAAAGGCAATGTATTAGGCATGATGCCTCAC 582
||||.|||.|...||||||..|.|||||||||.|.|||||||||||.|||
BPUM_0601___p 533 TTGCAGGTATTACGAATGAAGAGGGCAATGTACTCGGCATGATGCCGCAC 582
BSNT_01107___ 583 CCTGAGCGCGCGGTCGATGAACTGCTTGGAAGCGCCGACGGTCTTAAATT 632
||||||||||||||.|||..|.|.||.||.|||||.|||||.||||||||
BPUM_0601___p 583 CCTGAGCGCGCGGTGGATTCATTACTAGGCAGCGCAGACGGACTTAAATT 632
BSNT_01107___ 633 GTTCCAGTCTATCGTGAAAAATTGGAGGGAAACTCATGTCACTACTGCTT 682
|||.||.|||||||||||||||||||||||.|||||||||||||||||||
BPUM_0601___p 633 GTTTCAATCTATCGTGAAAAATTGGAGGGACACTCATGTCACTACTGCTT 682
BSNT_01107___ 683 GA 684
||
BPUM_0601___p 683 GA 684
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