Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01105 and BPUM_0599
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_01105___purC.1.24716.seq
# -bsequence dna-align/BPUM_0599___purC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01105___purC-BPUM_0599___purC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01105___purC-BPUM_0599___purC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01105___purC
# 2: BPUM_0599___purC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 567/741 (76.5%)
# Similarity: 567/741 (76.5%)
# Gaps: 33/741 ( 4.5%)
# Score: 2076.0
#
#
#=======================================
BSNT_01105___ 1 GTGAAT-ATTGTGAAGAATGAACTTTTATACGAAGGAAAAGCAAAAAAGA 49
|| |.||||||..|.||||||.|.||||||||.|||||.|||||.|
BPUM_0599___p 1 ----ATGACTGTGAAACAAGAACTTCTCTACGAAGGCAAAGCGAAAAAAA 46
BSNT_01105___ 50 TCTACAAAACCGATGACGAAAACACGCTGTATGTCGTGTATAAAGACTCC 99
||||..|.|||||||||||..|.|...|.|||||||..|||||||||||.
BPUM_0599___p 47 TCTATCAGACCGATGACGAGCATATTTTATATGTCGAATATAAAGACTCA 96
BSNT_01105___ 100 GCCACTGCCTTTAACGGCGAGAAAAAAGCAGAAATCAGCGGGAAAGGGCG 149
||.||.||.|||||||||||.||.|||||.||||||...||.|||||..|
BPUM_0599___p 97 GCGACAGCATTTAACGGCGAAAAGAAAGCTGAAATCGAAGGCAAAGGCAG 146
BSNT_01105___ 150 CTTAAATAACGAGATTTCAAGCTTAAT-TTTCAAACACCTTCATG-GAAA 197
..|.||||||||.|||||||||||||| ||||||| ..||.|||| ||||
BPUM_0599___p 147 ACTGAATAACGAAATTTCAAGCTTAATCTTTCAAA-TGCTGCATGAGAAA 195
BSNT_01105___ 198 GGGCATTAACAATCATTTTATCGAGCGCATTTCGGAAACGGAACAGCTCA 247
||| ||.||||||||.|||.|..|.|||.||||.|||||.||||||||||
BPUM_0599___p 196 GGG-ATCAACAATCACTTTGTGAAACGCCTTTCTGAAACAGAACAGCTCA 244
BSNT_01105___ 248 TTAAAAAGGTAACGATTGTGCCGCTTGAAGTCGTGGTCAGAAATGTTGTG 297
||.|||||||...||||||.|||||||||||.||.||..|||||||.||.
BPUM_0599___p 245 TTCAAAAGGTGCAGATTGTACCGCTTGAAGTGGTTGTGCGAAATGTGGTA 294
BSNT_01105___ 298 GCAGGAAGCATGTCCAAACGTCTCGGCATTCCAGAAGGCACGGAGCTTGA 347
|||||.||.|||||.||.||.||.|||||||||||.||.||..||||.||
BPUM_0599___p 295 GCAGGCAGTATGTCAAAGCGCCTAGGCATTCCAGAGGGAACAAAGCTGGA 344
BSNT_01105___ 348 -GCAGCCGATT-ATCGAGTTTTACTACAAGGATGACGCGCTGGGTGATCC 395
.|| |.||| |||||||||||||||||.|||||.||.||.||.|||||
BPUM_0599___p 345 TACA--CCATTGATCGAGTTTTACTACAAAGATGATGCACTCGGCGATCC 392
BSNT_01105___ 396 GCTCATCACAGAAGATCATATTTGGCTTTTGAAAGCAGCGACTCCTGAGC 445
||||||.|||||||||||||||.|..||||..|.||||||||.||.||||
BPUM_0599___p 393 GCTCATTACAGAAGATCATATTCGCATTTTAGATGCAGCGACGCCAGAGC 442
BSNT_01105___ 446 AGGT--AGAAACCATTAAGTCCATTACAAAAACAGTAAACGAAGAGCTTC 493
|||| ||.|| ||.||....|||||||.|..||||||.|||||| |.
BPUM_0599___p 443 AGGTCGAGGAA--ATGAAACAGATTACAAGACAAGTAAATGAAGAG--TT 488
BSNT_01105___ 494 AAAGC--ATTTTCGACGATTGTCATGTCAGATTAATAGATTTCAAGCTTG 541
||||| ||.|||...||.||.|||||.|..|||||.|||||||||||||
BPUM_0599___p 489 AAAGCAAATCTTCTCAGACTGCCATGTGAATTTAATTGATTTCAAGCTTG 538
BSNT_01105___ 542 AATTCGGTCTAGATGCAGACGGGCAA--GTGCTTTTG---GCGGATGAAA 586
|||||||..||||| .|||.| || || .||||| ||.|||||.|
BPUM_0599___p 539 AATTCGGAATAGAT---CACGAG-AATCGT-ATTTTGCTAGCTGATGAGA 583
BSNT_01105___ 587 TTTCACCTGACACATG-CCGCTTGTGGGATAAAGAAACGAACGAAAAGCT 635
||||||||||.||.|| ..|||| |||||.|||||.||.|||||||||||
BPUM_0599___p 584 TTTCACCTGATACGTGTAGGCTT-TGGGACAAAGAGACAAACGAAAAGCT 632
BSNT_01105___ 636 GGACAAAGATTTATTCAGACGCAATCTGGGAAGCTTAACCGACGCATACG 685
.||.|||||..|.||||||||.||.|||||..|||||||..|.|||||||
BPUM_0599___p 633 TGATAAAGACGTGTTCAGACGAAACCTGGGCGGCTTAACAAATGCATACG 682
BSNT_01105___ 686 AAGAGATTTTCAAAAGACTGGGAGGCATTCATCATGTATAA 726
||||.||||||||||||||.||||||..|.|.|||||||||
BPUM_0599___p 683 AAGAAATTTTCAAAAGACTTGGAGGCCATAAACATGTATAA 723
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