Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01104 and BPUM_0598
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_01104___purB.1.24716.seq
# -bsequence dna-align/BPUM_0598___purB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01104___purB-BPUM_0598___purB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01104___purB-BPUM_0598___purB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01104___purB
# 2: BPUM_0598___purB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1300
# Identity: 1057/1300 (81.3%)
# Similarity: 1057/1300 (81.3%)
# Gaps: 8/1300 ( 0.6%)
# Score: 4303.0
#
#
#=======================================
BSNT_01104___ 1 ATGATCGAACGTTATTCAAGACCTGAAATGTCCGCGATTTGGACGGATGA 50
||||||||||||||..||.||||.||||||||.||.||.|||||.||.||
BPUM_0598___p 1 ATGATCGAACGTTACGCACGACCAGAAATGTCAGCAATCTGGACAGAGGA 50
BSNT_01104___ 51 AAACAGATTTCAAGCATGGCTGGAGGTAGAGATTCTTGCCTGTGAAGCGT 100
|||||.||||.|.||||||||.||.|||||.|||||.||.||||||||.|
BPUM_0598___p 51 AAACAAATTTAATGCATGGCTTGAAGTAGAAATTCTCGCTTGTGAAGCTT 100
BSNT_01104___ 101 GGGCGGAGCTTGGCGTCATTCCGAAAGAAGA---TGTAAAAGTTATGCGT 147
||||.||||||||.||||||||||||||||| |||.| .|||||||
BPUM_0598___p 101 GGGCAGAGCTTGGTGTCATTCCGAAAGAAGACGTTGTGA---CTATGCGT 147
BSNT_01104___ 148 GAGAACGCATCATTTGACATCAACCGCATTTTAGAAATCGAAAAGGACAC 197
.||||.|||...|||||.||..|.||.|||.||||.||.|||.|.|||||
BPUM_0598___p 148 AAGAATGCAAGCTTTGATATTGATCGTATTCTAGAGATTGAACAAGACAC 197
BSNT_01104___ 198 GCGCCATGACGTTGTCGCTTTTACGCGCGCCGTTTCCGAATCACTGGGCG 247
||||||||||||.||.||.||||||||.||.||.||.|||||.||.||.|
BPUM_0598___p 198 GCGCCATGACGTGGTTGCCTTTACGCGTGCTGTATCTGAATCTCTAGGAG 247
BSNT_01104___ 248 AAGAAAGAAAATGGGTGCACTACGGATTAACGTCAACTGACGTTGTTGAT 297
||||||||||.|||||.||.|||||.|||||.||.||.|||||.||.|||
BPUM_0598___p 248 AAGAAAGAAAGTGGGTTCATTACGGGTTAACCTCTACAGACGTGGTGGAT 297
BSNT_01104___ 298 ACGGCTCTTTCCTACTTATTAAAACAGGCAAACGATATTTTGCTCAAGGA 347
|||||.|||||.||..|||||||||||||.||||||||.|||||||||||
BPUM_0598___p 298 ACGGCGCTTTCATATCTATTAAAACAGGCGAACGATATCTTGCTCAAGGA 347
BSNT_01104___ 348 TCTTGAGAGATTTGTTGACATTATTAAAGAAAAAGCGAAAGAACATAAAT 397
..|||||||||||||||||||..|.|||||||||||||||||.|||||||
BPUM_0598___p 348 CATTGAGAGATTTGTTGACATCCTAAAAGAAAAAGCGAAAGAGCATAAAT 397
BSNT_01104___ 398 ACACAGTCATGATGGGGCGCACGCACGGCGTACACGCTGAGCCTACAACT 447
||||.|||||||||||.||.||.||.||.|||||||||||.||.|||||.
BPUM_0598___p 398 ACACTGTCATGATGGGCCGTACACATGGTGTACACGCTGAACCGACAACA 447
BSNT_01104___ 448 TTCGGCTTAAAACTTGCGCTTTGGCATGAAGAAATGAAACGTAATCTTGA 497
||.||..|.||.||||..||||||.|.|||||||||||.|||||.||.||
BPUM_0598___p 448 TTTGGTCTGAAGCTTGGTCTTTGGTACGAAGAAATGAAGCGTAACCTAGA 497
BSNT_01104___ 498 GCGCTTCAAACAAGCGAAAGCAGGCATCGAGGTTGGAAAGATTTCCGGCG 547
.||.||.||||||||.|||||.||||||||..||||.||.|||||.||.|
BPUM_0598___p 498 ACGTTTTAAACAAGCAAAAGCTGGCATCGAATTTGGCAAAATTTCTGGGG 547
BSNT_01104___ 548 CTGTCGGCACATATGCGAACATTGATCCATTTGTTGAACAATATGTCTGT 597
||||.|||||||||||||||||.||.||.||||||||.||||||||.|||
BPUM_0598___p 548 CTGTTGGCACATATGCGAACATCGACCCGTTTGTTGAGCAATATGTATGT 597
BSNT_01104___ 598 GAGAAGCTCGGATTGAAAGCAGCACCGATTTCCACTCAAACCCTTCAGCG 647
||||||||.||..|.|||||.|||||.||.|||||.||||||.|.|||||
BPUM_0598___p 598 GAGAAGCTTGGCATCAAAGCTGCACCAATCTCCACCCAAACCTTGCAGCG 647
BSNT_01104___ 648 TGACCGCCATGCTGACTATATGGCAACACTTGCTTTGATCGCGACAAGCA 697
|||.||.|||||.|||||.||||||||.|||||..|..||||.|||||||
BPUM_0598___p 648 TGATCGTCATGCAGACTACATGGCAACTCTTGCACTCGTCGCAACAAGCA 697
BSNT_01104___ 698 TCGAGAAATTCGCTGTGGAAATCCGCGGACTGCAAAAGAGTGAAACACGT 747
|.||.|||||.|||||.|||||.||.||.||.||||||||||||||||||
BPUM_0598___p 698 TTGAAAAATTTGCTGTTGAAATTCGTGGTCTTCAAAAGAGTGAAACACGT 747
BSNT_01104___ 748 GAAGTTGAGGAATTTTTCGCGAAAGGGCAAAAGGGTTCATCTGCAATGCC 797
|||||.||.||.||.||.||.|||||.|||||.||.|||||.||||||||
BPUM_0598___p 748 GAAGTAGAAGAGTTCTTTGCAAAAGGACAAAAAGGATCATCAGCAATGCC 797
BSNT_01104___ 798 GCATAAACGAAATCCGATTGGCTCTGAAAACATGACAGGCATGGCGCGCG 847
|||||||||.||.||.||.|||||||||||.|||||.||.||.||.||.|
BPUM_0598___p 798 GCATAAACGGAACCCAATCGGCTCTGAAAATATGACGGGAATTGCCCGTG 847
BSNT_01104___ 848 TGATCCGCGGCTACATGATGACAGCTTACGAAAATGTTCCATTATGGCAT 897
|||||||.||.||.|||.||||||||||.||||||||.|||.|.||||||
BPUM_0598___p 848 TGATCCGTGGATATATGCTGACAGCTTATGAAAATGTACCACTTTGGCAT 897
BSNT_01104___ 898 GAGCGCGATATTTCTCATTCTTCAGCAGAACGGATTATTCTTCCGGATGC 947
|||||.||||||||||||||.||.||.|||||.||.|||.|.||.|||||
BPUM_0598___p 898 GAGCGTGATATTTCTCATTCGTCTGCTGAACGCATCATTTTACCAGATGC 947
BSNT_01104___ 948 GACAATTGCGCTGAACTACATGCTGAACCGCTTCTCCAACATCGTGAAGA 997
.||.|||||.||||||||||||||.|||||.|||||.|||||.|||||.|
BPUM_0598___p 948 AACGATTGCACTGAACTACATGCTAAACCGTTTCTCAAACATTGTGAAAA 997
BSNT_01104___ 998 ACTTAACGGTCTTCCCGGAAAACATGAAGCGCAACATGGACCGCACTCTC 1047
||||.|||||||||||.||.||||||||.|||||||||||||||||.||.
BPUM_0598___p 998 ACTTGACGGTCTTCCCTGAGAACATGAAACGCAACATGGACCGCACACTT 1047
BSNT_01104___ 1048 GGCCTTATCTATTCTCAGCGTGTGCTGCTTGCTTTGATTGACACAGGCCT 1097
|||.|.||.||.||.||||||||.||.|||||.||.||.||.||.|||.|
BPUM_0598___p 1048 GGCTTGATTTACTCACAGCGTGTTCTTCTTGCATTAATCGATACTGGCAT 1097
BSNT_01104___ 1098 TACACGTGAAGAAGCCTATGATACTGTTCAGCCGAAAGCAATGGAAGCGT 1147
..||||||||||.||.||||||||.||||||||.||||||||||||||||
BPUM_0598___p 1098 GGCACGTGAAGAGGCATATGATACGGTTCAGCCAAAAGCAATGGAAGCGT 1147
BSNT_01104___ 1148 GGGAAAAACAAGTGCCGTTCCGCGAACTTGTTGAAGCGGAAGAGAAAATC 1197
||||.||.||||||||.|||||...|.|.||.||.|||||.||.||||||
BPUM_0598___p 1148 GGGAGAAGCAAGTGCCATTCCGTTCATTAGTAGAGGCGGAGGAAAAAATC 1197
BSNT_01104___ 1198 ACGTCACGTCTT-TCTCCAGAAAAAATTGCTGACTGCTTTGATTACAATT 1246
||.||||| ||| .|.||.|||.||||.|||||||||||.||||||||||
BPUM_0598___p 1198 ACATCACG-CTTAACACCTGAACAAATCGCTGACTGCTTCGATTACAATT 1246
BSNT_01104___ 1247 ACCATCTGAAAAATGTTGATCTGATCTTTGAACGTTTAGGTTTAGCATAG 1296
|.||..||||||||||.|||.||||.||.||||||.|||||.|.||.||.
BPUM_0598___p 1247 ATCACTTGAAAAATGTCGATATGATTTTCGAACGTCTAGGTCTTGCGTAA 1296
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