Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01101 and BPUM_0596

See Amino acid alignment / Visit BSNT_01101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_01101___purE.1.24716.seq
#    -bsequence dna-align/BPUM_0596___purE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01101___purE-BPUM_0596___purE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01101___purE-BPUM_0596___purE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01101___purE
# 2: BPUM_0596___purE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 506
# Identity:     375/506 (74.1%)
# Similarity:   375/506 (74.1%)
# Gaps:          34/506 ( 6.7%)
# Score: 1365.5
# 
#
#=======================================

BSNT_01101___      1 ATGCAGCCGCTAGTAGGAATCATCATGGGAAGCACTTCCGATTGGGAGAC     50
                     |||.|||||||.|||||..|||||||||||||.||.||.||||||||.||
BPUM_0596___p      1 ATGAAGCCGCTTGTAGGTGTCATCATGGGAAGTACATCTGATTGGGAAAC     50

BSNT_01101___     51 AATGAAACACGCATGCGACATACTT-GACGAACTCAATGTTCCGTACGAA     99
                     |||||||.|.||.|||||.|| ||| ||.|||.|..|..|||||||.|||
BPUM_0596___p     51 AATGAAAAATGCGTGCGATAT-CTTAGAGGAATTAGACATTCCGTATGAA     99

BSNT_01101___    100 AAAAAGGTCGTTTCCGCTCACCGGACGCCTGATTTCATGTTTGAATATG-    148
                     |||.|||||||.|||||.||||||||.|||||.||.||||||||||||| 
BPUM_0596___p    100 AAACAGGTCGTATCCGCACACCGGACACCTGACTTGATGTTTGAATATGC    149

BSNT_01101___    149 --CTGAAACTGCTAGAGAAAGAGGCATCAAGGTGATTATTGCCGGTGCCG    196
                       |.|||   ||.||||..|.|||..|.||.||.||.|||||||||||.|
BPUM_0596___p    150 GACAGAA---GCAAGAGGTAAAGGACTAAAAGTCATCATTGCCGGTGCTG    196

BSNT_01101___    197 GAGGAGCGGCGCATCTGCCAGGGATGACGGCTGCGAAAACAACACTGCCA    246
                     ||||.||.||.|||.|.||.||||||...||.||.|||||.||||||||.
BPUM_0596___p    197 GAGGCGCAGCACATTTACCGGGGATGGTCGCAGCAAAAACGACACTGCCG    246

BSNT_01101___    247 GTCATTGGAGTTCCGGTTCAGTCCAAGGCGCTGAACGGAATGGATTCACT    296
                     ||||||||.||.||.||.||.||.||.||.||.||.|||.|.||||| ||
BPUM_0596___p    247 GTCATTGGTGTGCCCGTACAATCAAAAGCACTAAATGGACTAGATTC-CT    295

BSNT_01101___    297 TCTT-TCCATCGTCCAAATGCCTGGAGGCGTGCCTGTTGCGACAACATCC    345
                     |.|| ||||||||.||||||||.||.||.||.||.|||||||||..|.|.
BPUM_0596___p    296 TATTATCCATCGTTCAAATGCCAGGCGGTGTACCCGTTGCGACAGTAGCG    345

BSNT_01101___    346 ATCGGCAAAGCGGGTGCTGTGAAC----GCAGGCCTGTTAGCGGCGCAAA    391
                     ||.||.|||||.|||||    |||    |||||.||..||||.||.||||
BPUM_0596___p    346 ATTGGTAAAGCCGGTGC----AACAAATGCAGGTCTTCTAGCCGCACAAA    391

BSNT_01101___    392 TTTTGTCAGCATTTGACGAAGAC--------CTTGCCCGTAAGCTGGATG    433
                     |..|.|||||||||||.||| ||        ||.||       ||.||..
BPUM_0596___p    392 TGATTTCAGCATTTGATGAA-ACAATCGCTGCTCGC-------CTTGAGA    433

BSNT_01101___    434 AGAGAAGAGAAAATACAAAACAGACAGTGTTAGAAAGCAGTGATCAGCTT    483
                     |.||||||||..|.|||||||||||.||..||||||||||||||||||||
BPUM_0596___p    434 AAAGAAGAGAGCAAACAAAACAGACTGTACTAGAAAGCAGTGATCAGCTT    483

BSNT_01101___    484 GTCTAA    489
                     |.||||
BPUM_0596___p    484 GGCTAA    489


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