Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01093 and BPUM_0592

See Amino acid alignment / Visit BSNT_01093 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_01093___pbuG.1.24716.seq
#    -bsequence dna-align/BPUM_0592___pbuG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01093___pbuG-BPUM_0592___pbuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01093___pbuG-BPUM_0592___pbuG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01093___pbuG
# 2: BPUM_0592___pbuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1338
# Identity:     997/1338 (74.5%)
# Similarity:   997/1338 (74.5%)
# Gaps:          27/1338 ( 2.0%)
# Score: 3649.5
# 
#
#=======================================

BSNT_01093___      1 TTGAAAAAGTATTTTCAGTTTGATGAGCTGGGCACCAGCTATCGCAATGA     50
                     ||||||.|||.|||||||||||||||..|.||.||.|..||.||||..||
BPUM_0592___p      1 TTGAAACAGTTTTTTCAGTTTGATGAATTAGGAACGAATTACCGCAGAGA     50

BSNT_01093___     51 AATCATTGGCGGATTAACGACTTTTTTATCTATGGCATATATATTGTTCG    100
                     ||||||.||.||.|||||.||.|||||..|.|||||.||.||.|||||.|
BPUM_0592___p     51 AATCATCGGTGGTTTAACCACATTTTTGGCGATGGCTTACATTTTGTTTG    100

BSNT_01093___    101 TCAATCCGATTACGCTTGCTTT-------GGACAGCGTGAAAGATTTTCC    143
                     ||||||||||.||.||||||||       |.||.|       ||||||||
BPUM_0592___p    101 TCAATCCGATCACACTTGCTTTAGTGTCGGTACCG-------GATTTTCC    143

BSNT_01093___    144 GGAGGCACTGAGAATTGACCAGGGTGCGGTCTTTACGGCGACAGCGCTGG    193
                     .||...|.|..|||||||.||.||.||.||||||||.|||||.|||||.|
BPUM_0592___p    144 AGATAAATTACGAATTGATCAAGGCGCTGTCTTTACAGCGACGGCGCTAG    193

BSNT_01093___    194 CGTCTGCAGCAGGCTGTATCTTAATGGGATTAATAGCGAGATATCCGATT    243
                     |.|||||.|||||.|||||..|.|||||..||||.||.||.|||||||||
BPUM_0592___p    194 CCTCTGCCGCAGGGTGTATTCTGATGGGGCTAATTGCTAGGTATCCGATT    243

BSNT_01093___    244 GCCATCGCGCCGGGTATGGGGCTGAACGCGTTTTTTGCGTTTTCTGTTGT    293
                     ||.||.||.||.||||||||..|.||.||.|||||.||.||.||.|||||
BPUM_0592___p    244 GCGATTGCTCCAGGTATGGGCTTAAATGCCTTTTTCGCCTTCTCGGTTGT    293

BSNT_01093___    294 CCTTGGTATGGGTATTTCATGGCAGGCAGCTTTGTCTGGTGTTTTTATTT    343
                     .|||||.|||||.|||.|||||.|.|||||..|.||||||||.|||.|.|
BPUM_0592___p    294 TCTTGGCATGGGCATTACATGGGAAGCAGCACTTTCTGGTGTGTTTGTAT    343

BSNT_01093___    344 CAGGCCTTATTTTCGTTGCTCTTTCTTTAACAGGTTTTCGTGAAAAAATC    393
                     ||||..|.|||||||||||.|||||||||||||||||.||||||||||||
BPUM_0592___p    344 CAGGATTGATTTTCGTTGCCCTTTCTTTAACAGGTTTCCGTGAAAAAATC    393

BSNT_01093___    394 ATCAACGCCATTCCGCCTGAGCTGAAATTGGCAGTCGGTGCGGGGATCGG    443
                     |||||.||.||||||.|||||||.||..|.||.||.||||||||.||.||
BPUM_0592___p    394 ATCAATGCTATTCCGGCTGAGCTAAAGCTAGCGGTTGGTGCGGGTATTGG    443

BSNT_01093___    444 CCTGTTTATTACATTCGTTGGTTTGCAAGGCTCAGGAATCATTACTGCAA    493
                     .||.||.|||||.||.||.|||.|.|||||.||.||.||.||..||...|
BPUM_0592___p    444 TCTATTCATTACGTTTGTCGGTCTACAAGGATCTGGTATTATCGCTAATA    493

BSNT_01093___    494 ATCCTTCTACGCTCGTCACGATCGGAAACATTCACAGCGGTCCTGTGCTG    543
                     ||..|..|||||||||..||||.|||||||||||.||.||||||||..|.
BPUM_0592___p    494 ATGATAATACGCTCGTTTCGATTGGAAACATTCATAGTGGTCCTGTCTTA    543

BSNT_01093___    544 TTAACGATTTTCGGTGTGATTGTCACGGTTATTTTAATGGTGCTTCGCGT    593
                     ||||||.|.||.|||.|..|.||.||.||||||||||||||.||.||.||
BPUM_0592___p    544 TTAACGGTGTTTGGTATCGTGGTGACTGTTATTTTAATGGTTCTGCGAGT    593

BSNT_01093___    594 GAACGCAGGCGTGTTTATCGGGATGCTGTTAACAGCGGTTGCCGGCATGA    643
                     |||.|||||.||.||.||.||||||||..|.|||||..||||.||.||||
BPUM_0592___p    594 GAATGCAGGTGTCTTCATTGGGATGCTTGTGACAGCTATTGCAGGAATGA    643

BSNT_01093___    644 TTTTCGGTTTGGTTCCGGTTCCGACTCAAATTGTCGGCAGTGTGCCGAGC    693
                     ||.|.|||.|.||.||.||.|||||.||||||||.||.|||.|.||.|| 
BPUM_0592___p    644 TTGTTGGTCTTGTCCCAGTACCGACGCAAATTGTGGGAAGTATTCCAAG-    692

BSNT_01093___    694 CTTG-CGCCGACTTTCGGACAAGCGTGGATTCACCTCCCGGATATTTTCT    742
                     |||| |.||.||.|||||.|||||.|.||||||..|.||.||.|||||||
BPUM_0592___p    693 CTTGTCTCCAACCTTCGGTCAAGCCTTGATTCATTTGCCAGACATTTTCT    742

BSNT_01093___    743 CCGTACAAATGCTGATCGTTATTTTAACATTCTTGTTTGTCGGATTTTTT    792
                     |..|.||||||||..||||.|||||.||.|||||.||.||.||.||.|||
BPUM_0592___p    743 CAATCCAAATGCTTGTCGTGATTTTGACGTTCTTATTCGTTGGGTTCTTT    792

BSNT_01093___    793 GATACAGCTGGTACACTTGTTGCTGTGGCAACACAAGCTGGTTTAATGAA    842
                     ||||||||.||.||.|||||.|||||.|||||.|||||||||.||||   
BPUM_0592___p    793 GATACAGCAGGAACGCTTGTGGCTGTTGCAACCCAAGCTGGTCTAAT---    839

BSNT_01093___    843 GGAAAACAAAT----TGCCGCGTGCGGGCCGTGCGCTTTTAGCTGATTCA    888
                      |||||..|||    ||||||||||.||..|.||.|||.||||.||||||
BPUM_0592___p    840 -GAAAAATAATGAGCTGCCGCGTGCAGGAAGAGCACTTCTAGCGGATTCA    888

BSNT_01093___    889 TCTTCTATTGTGATCGGTGCCGTGCTTGGTACGTCTACAACAACTTCTTA    938
                     |||||.|||||..|.|||.|..|.|||||.||.||.||.|||||.|||||
BPUM_0592___p    889 TCTTCAATTGTTGTAGGTTCTATTCTTGGAACATCGACGACAACATCTTA    938

BSNT_01093___    939 CGTGGAATCAAGCTCAGGTGTCGCTGCGGGTGCCCGTTCAGGATTTGCCG    988
                     .||.|||||.|||||||||||.||.||.|||||.|||||.||||||||..
BPUM_0592___p    939 TGTTGAATCTAGCTCAGGTGTTGCAGCAGGTGCACGTTCTGGATTTGCAT    988

BSNT_01093___    989 CAATTGTAACAGGGATTCTCTTTTTACTGGCTACGTTTTTCTCTCCGCTC   1038
                     |..|.||.|||||.|||.||||.||.||.||.|.|||.|||||.|||||.
BPUM_0592___p    989 CTGTCGTGACAGGTATTTTCTTCTTGCTTGCGATGTTCTTCTCGCCGCTT   1038

BSNT_01093___   1039 CTATCAGTCGTTACGTCAAATGTAACAGCGCCGGCGCTTATTATTGTTGG   1088
                     .||||..|||||||....|||||.|||||.||.||..|.||.|||||.||
BPUM_0592___p   1039 TTATCCATCGTTACAAAGAATGTGACAGCACCTGCTTTAATCATTGTGGG   1088

BSNT_01093___   1089 TGCATTGATGGTGGCGCCGCTTGGCAAAATCGCTTGGGATAAGTTCGAAG   1138
                     .|||.|||||||.||.|||||||..||.||.||.||||||...||.|||.
BPUM_0592___p   1089 GGCACTGATGGTCGCTCCGCTTGCGAAGATTGCATGGGATCGTTTTGAAA   1138

BSNT_01093___   1139 TGGCCGTTCCTGCTTTCCTTACCATGATCATGATGCCGTTAACGTACAGC   1188
                     |.||.||.||.||.|||.|.||.|||||.||||||||..|.||.|||||.
BPUM_0592___p   1139 TTGCTGTACCAGCGTTCTTAACGATGATTATGATGCCACTCACATACAGT   1188

BSNT_01093___   1189 ATAGCGACTGGTATTGCCATCGGATTTATTTTCTATCCGATTACAATGGT   1238
                     ||.||.||.||.|||||..|.||.|||||||||||.||||||||.|||.|
BPUM_0592___p   1189 ATTGCAACAGGGATTGCGGTTGGCTTTATTTTCTACCCGATTACGATGAT   1238

BSNT_01093___   1239 GTGCAAAGGAAAAGCAAAAGAGGTTCATCCAATCATGTACGGGCTGTTTC   1288
                     .|..|||||.|||||.|||||..|.|||||.||.|||||.||..|||||.
BPUM_0592___p   1239 CTTTAAAGGGAAAGCCAAAGAAATACATCCGATTATGTATGGATTGTTTG   1288

BSNT_01093___   1289 TCGTATTTATCCTGTACTTTATCTTCTTAAA--ATAA-   1323
                     |..|.|||||.||.||||||...||||||||  ||.| 
BPUM_0592___p   1289 TGATCTTTATTCTCTACTTTGCTTTCTTAAATCATTAA   1326


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.