Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01091 and BPUM_0548
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_01091___guaA.1.24716.seq
# -bsequence dna-align/BPUM_0548___guaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01091___guaA-BPUM_0548___guaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01091___guaA-BPUM_0548___guaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01091___guaA
# 2: BPUM_0548___guaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1552
# Identity: 1280/1552 (82.5%)
# Similarity: 1280/1552 (82.5%)
# Gaps: 11/1552 ( 0.7%)
# Score: 5336.0
#
#
#=======================================
BSNT_01091___ 1 GTGACAACCATGACAAAGTTAGTGAATGAAATGATTCTTGTCCTTGATTT 50
||||||||.|||||.||||||||||||.|.||.||.|||||
BPUM_0548___g 1 ---------ATGACAAATTTAGTAAATGAAATGATTTTGGTTCTAGATTT 41
BSNT_01091___ 51 CGGCAGTCAGTATAACCAGCTGATTACACGCCGTATCCGTGAATTCGGTG 100
||||||||||||.||.|||.||||.|||||||||||.||||||||.||||
BPUM_0548___g 42 CGGCAGTCAGTACAATCAGTTGATCACACGCCGTATTCGTGAATTTGGTG 91
BSNT_01091___ 101 TTTACAGCGAGCTGCATCCACATACATTGACGGCTGAAGAAATTAAAAAA 150
|.|||||.|||||.|||||.||.||.||.||.|||||||||||||||.||
BPUM_0548___g 92 TGTACAGTGAGCTTCATCCGCACACTTTAACTGCTGAAGAAATTAAAGAA 141
BSNT_01091___ 151 ATGAATCCAAAAGGAATTATTTTATCCGGCGGTCCAAACAGTGTGTATGA 200
|||...||.||||||||.||..|.||.|||||.|||||||||||.|||||
BPUM_0548___g 142 ATGGCGCCTAAAGGAATCATCCTTTCTGGCGGACCAAACAGTGTTTATGA 191
BSNT_01091___ 201 TGAAAACTCTTTCCGCTGTGACGAGAAAATCTTCGAGCTTGATATTCCTG 250
||||...||||||||||||||.||.||.||.||.||.||.||.|||||.|
BPUM_0548___g 192 TGAAGGATCTTTCCGCTGTGATGAAAAGATTTTTGATCTAGACATTCCGG 241
BSNT_01091___ 251 TTTTGGGAATTTGCTACGGCATGCAGCTGATGACTCATTACCTTGGCGGT 300
||.|.||.||||||||||||||||||||.||||||||.||..|.|||||.
BPUM_0548___g 242 TTCTAGGCATTTGCTACGGCATGCAGCTCATGACTCACTATTTAGGCGGG 291
BSNT_01091___ 301 AAAGTTGAAGCGGCAAGCCAGCGTGAATACGGAAAAGCAAACATCCGCAT 350
|||||.||||||||||||||||||||||||||||||||..|.||||.|||
BPUM_0548___g 292 AAAGTAGAAGCGGCAAGCCAGCGTGAATACGGAAAAGCGGATATCCACAT 341
BSNT_01091___ 351 CGAAGGCACACCTGATTTGTTCAGAGATCTTCCGAATGAACAAGTGGTTT 400
..|.||.||.||||.|||.||.|.|||.|||||||.|||.|||||.||||
BPUM_0548___g 342 TAATGGAACGCCTGCTTTATTTAAAGACCTTCCGACTGATCAAGTTGTTT 391
BSNT_01091___ 401 GGATGAGCCACGGCGATTTGGTTGTAGAAGTTCCTGAAGGCTTCACTGTT 450
||||||||||.||.||..|.|||||.|||||.||.||||||||.||.|||
BPUM_0548___g 392 GGATGAGCCATGGTGACCTCGTTGTTGAAGTACCAGAAGGCTTTACAGTT 441
BSNT_01091___ 451 GACGCGACAAG-CCATCACTGCCCGAACTCAGCAATGAGCAAAGCGGACA 499
||.||.||||| .|| ||.||.||.||||||||.||||||..|||.||.|
BPUM_0548___g 442 GATGCAACAAGTGCA-CATTGTCCAAACTCAGCGATGAGCTTAGCTGAGA 490
BSNT_01091___ 500 AAAAATGGTATGGCGTTCAGTTCCACCCGGAAGTGCGCCACTCTGAATAC 549
|.||.|..||||||||||||||||||||.||.||.||.||.|||||.|||
BPUM_0548___g 491 AGAATTTCTATGGCGTTCAGTTCCACCCAGAGGTTCGTCATTCTGAGTAC 540
BSNT_01091___ 550 GGCAATGATCTTCTGAAAAACTTTGTATTCGGTGTTTGCGAATGCGAAGG 599
||.|||||.||..|||||||||||||.|||||.||.||.||.|||||.||
BPUM_0548___g 541 GGAAATGACCTATTGAAAAACTTTGTCTTCGGCGTGTGTGATTGCGATGG 590
BSNT_01091___ 600 CGAATGGTCAATGGAGAACTTTATCGAAATCGAAATGCAAAAAATCCGTG 649
|.|||||||||||||||||||.||.||||||||||||||.||||||||||
BPUM_0548___g 591 CAAATGGTCAATGGAGAACTTCATTGAAATCGAAATGCAGAAAATCCGTG 640
BSNT_01091___ 650 AAACGGTCGGAGACAAACAGGTTCTTTGCGCGCTAAGCGGCGGCGTTGAT 699
||||.||.|||||||||||.||.||.|||||.|||||||||||.||.|||
BPUM_0548___g 641 AAACAGTAGGAGACAAACAAGTACTGTGCGCACTAAGCGGCGGTGTGGAT 690
BSNT_01091___ 700 TCCTCTGTTGTTGCTGTTTTGATTCATAAAGCGATCGGCGACCAGCTGAC 749
||.||||||||.||.||.|||||.||.|||||.|||||.||.||||||||
BPUM_0548___g 691 TCATCTGTTGTGGCGGTATTGATCCACAAAGCCATCGGTGATCAGCTGAC 740
BSNT_01091___ 750 TTGTATCTTTGTAGACCATGGTCTTCTCCGGAAAGGCGAAGCTGAGGGTG 799
.|||||.||.||.|||||.||||||||.||.|||||||||||.||.||.|
BPUM_0548___g 741 ATGTATTTTCGTTGACCACGGTCTTCTTCGCAAAGGCGAAGCAGAAGGGG 790
BSNT_01091___ 800 TTATGAAAACATTCAGCGAAGGCTTTAACATGAATGTGATTAAAGTAGAC 849
|||||||.|||||.||||||||.||.||||||||.||||||||||||||.
BPUM_0548___g 791 TTATGAAGACATTTAGCGAAGGTTTCAACATGAACGTGATTAAAGTAGAT 840
BSNT_01091___ 850 GCAAAAGATCGATTCTTAAACAAACTAAAAGGCGTTTCTGATCCTGAGCA 899
|||||||||||.|||||||||||.||||||||.||.||||||||||||||
BPUM_0548___g 841 GCAAAAGATCGTTTCTTAAACAAGCTAAAAGGTGTGTCTGATCCTGAGCA 890
BSNT_01091___ 900 AAAACGCAAAATCATCGGTAATGAATTCATTTACGTATTCGATGATGAAG 949
||||||.||||||||||||||.||||||||.||.|||||||||||||||.
BPUM_0548___g 891 AAAACGTAAAATCATCGGTAACGAATTCATCTATGTATTCGATGATGAAT 940
BSNT_01091___ 950 CGGACAAGCTCAAAGGCATCGACTACCTTGCACAAGGTACGCTTTACACA 999
||||||||||.|||||.||||||||..|.||||||||.||.|||||||||
BPUM_0548___g 941 CGGACAAGCTAAAAGGAATCGACTATTTAGCACAAGGAACACTTTACACA 990
BSNT_01091___ 1000 GATATCATCGAGAGCGGTACAGCAACGGCACAAACGATCAAATCTCACCA 1049
||||||||.||||||||.|||||||||||||||||.||||||||||||||
BPUM_0548___g 991 GATATCATTGAGAGCGGAACAGCAACGGCACAAACAATCAAATCTCACCA 1040
BSNT_01091___ 1050 CAATGTCGGCGGACTTCCTGAAGACATGCAGTTTGAGCTGATCGAGCCAT 1099
|||.||.||.||.|||||.||||||||||||||.||..||||.||||||.
BPUM_0548___g 1041 CAACGTAGGTGGTCTTCCAGAAGACATGCAGTTCGAATTGATTGAGCCAC 1090
BSNT_01091___ 1100 TAAATACGCTCTTCAAAGACGAAGTGCGCGCGCTTGGCACAGAGCTCGGC 1149
|.|||||.||.|||||.||.|||||.||.||.||.||..|||||||.||.
BPUM_0548___g 1091 TCAATACACTATTCAAGGATGAAGTCCGTGCCCTAGGTTCAGAGCTGGGT 1140
BSNT_01091___ 1150 ATTCCGGATGAAATCGTATGGCGTCAGCCGTTCCCAGGACCGGGACTCGG 1199
|||||.||.||.|||||.|||.|.|||||.||||||||.||.|||||.||
BPUM_0548___g 1141 ATTCCTGACGACATCGTCTGGAGACAGCCATTCCCAGGTCCAGGACTAGG 1190
BSNT_01091___ 1200 AATCCGCGTTCTTGGCGAAGTAACAGAAGAAAAACTAGAAATCGTTCGTG 1249
.|||||.||.||.||.|||.|..|.||||||||||||||||||||.||||
BPUM_0548___g 1191 TATCCGTGTACTAGGTGAAATTTCTGAAGAAAAACTAGAAATCGTCCGTG 1240
BSNT_01091___ 1250 AATCAGATGCAATCTTGCGTGAAGAAATTGCAAATCACGGCTTAGAGCGT 1299
|||||||||||||..|.||.|||||||||||.||...||||.|.||.||.
BPUM_0548___g 1241 AATCAGATGCAATTCTACGCGAAGAAATTGCCAACTTCGGCCTTGAACGC 1290
BSNT_01091___ 1300 GATATCTGGCAATACTTCACTGTTCTTCCTGACATCCGCAGCGTTGGTGT 1349
||.|||||||||||||||||.||||||||.||||||||||||||.|||||
BPUM_0548___g 1291 GACATCTGGCAATACTTCACGGTTCTTCCAGACATCCGCAGCGTAGGTGT 1340
BSNT_01091___ 1350 TATGGGTGACGCAAGAACATATGATTACACAATCGGAATCCGCGCCGTTA 1399
.||||||||||||||||||||.||.|||||||||||.|||||.||.||||
BPUM_0548___g 1341 CATGGGTGACGCAAGAACATACGACTACACAATCGGCATCCGTGCTGTTA 1390
BSNT_01091___ 1400 CATCAATCGACGGCATGACATCTGACTGGGCGCGTATCCCGTGGGATGTG 1449
|.||.||.|||||.|||||...|||||||||..|.|||||.||||||||.
BPUM_0548___g 1391 CTTCGATTGACGGTATGACGAGTGACTGGGCAAGAATCCCTTGGGATGTA 1440
BSNT_01091___ 1450 CTTGAAGTCATTTCGACACGTATCGTAAACGAAGTGAAGCACATTAACCG 1499
||||||...||.||.||.||||||||.||.|||||||||||..|.|||||
BPUM_0548___g 1441 CTTGAAAAGATCTCAACTCGTATCGTGAATGAAGTGAAGCATGTGAACCG 1490
BSNT_01091___ 1500 CGTGGTGTACGATATTACAAGTAAGCCGCCTGCGACGATTGAGTGGGAAT 1549
|||||||||.||||||||.||||||||||||||.||.|||||||||||||
BPUM_0548___g 1491 CGTGGTGTATGATATTACGAGTAAGCCGCCTGCTACAATTGAGTGGGAAT 1540
BSNT_01091___ 1550 AA 1551
.|
BPUM_0548___g 1541 GA 1542
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